RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CAPS2Q9BXY5 557 aa17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 CD244Q9BZW8 370 aa17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 ZNF700Q9H0M5 742 aa17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 EHD1Q9H4M9 534 aa17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 PLAAQ9Y263 795 aa17.46■□□□□ 0.39
SHKBP1-202ENST00000593764 RP1L1Q8IWN7 2480 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 A0A087X1B8 175 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 NSG1A0A0A6YYJ2 146 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 TTLL8A6PVC2 850 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 UBXN8O00124 270 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 TBX6O95947 436 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 CYC1P08574 325 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 C8orf89P0DMQ9 161 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 CD22P20273 847 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 HNF4AP41235 474 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 AGTR2P50052 363 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 SLBPQ14493 270 aaKnown RBP eCLIP17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 PLEKHN1Q494U1 663 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 AGAP7PQ5VUJ5 663 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 TMIGD1Q6UXZ0 262 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 PSMF1Q92530 271 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 PNPLA2Q96AD5 504 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 WDR34Q96EX3 536 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 PEX11GQ96HA9 241 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 IMMP1LQ96LU5 166 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 AGAP4Q96P64 663 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 PITHD1Q9GZP4 211 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 CLMPQ9H6B4 373 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 NT5DC2Q9H857 520 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 LANCL2Q9NS86 450 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 NUDT4Q9NZJ9 180 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 ZNF490Q9ULM2 529 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 NFU1Q9UMS0 254 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 COL12A1Q99715 3063 aa17.45■□□□□ 0.38
SHKBP1-202ENST00000593764 FLNCQ14315 2725 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 A0A096LPK6 155 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 CHST10O43529 356 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 CCNT2O60583 730 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 PRR35P0CG20 571 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 IL10P22301 178 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 TYK2P29597 1187 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 RAB8AP61006 207 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 RHAGQ02094 409 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 DOC2AQ14183 400 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 E2F2Q14209 437 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 PDK4Q16654 411 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 MINDY4Q4G0A6 757 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 LANCL3Q6ZV70 420 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 ABHD13Q7L211 337 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 VN1R5Q7Z5H4 357 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 KBTBD2Q8IY47 623 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 SNX31Q8N9S9 440 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 LRRN4CLQ8ND94 238 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 RHEBL1Q8TAI7 183 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 ISL2Q96A47 359 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 OR1F2PQ96R84 312 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 LUZP4Q9P127 313 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 B3GNT3Q9Y2A9 372 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 CSAG2Q9Y5P2 127 aa17.44■□□□□ 0.38
SHKBP1-202ENST00000593764 LRIT2A6NDA9 550 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 SUPT3HB4E1H0 165 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 CLGNO14967 610 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 SUPT3HO75486 399 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 KLHL2O95198 593 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 S100BP04271 92 aaPredicted RBP17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 CELA2AP08217 269 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 HNRNPH1P31943 449 aaKnown RBP17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 CASP2P42575 452 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 MAGEA12P43365 314 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 GLRBP48167 497 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 SERPINB8P50452 374 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 OLR1P78380 273 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 ACAP2Q15057 778 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 FAM83EQ2M2I3 478 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 TOR1AIP1Q5JTV8 583 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 MFSD4BQ5TF39 518 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 ADNP2Q6IQ32 1131 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 NIPAL1Q6NVV3 410 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 Q6ZS92 163 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 LRRC70Q7Z2Q7 622 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 CPEB2Q7Z5Q1 589 aaKnown RBP17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 IFT20Q8IY31 132 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 KRT78Q8N1N4 520 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 PLD6Q8N2A8 252 aaKnown RBP17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 ZADH2Q8N4Q0 377 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 PLPP5Q8NEB5 264 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 TTLQ8NG68 377 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 UHMK1Q8TAS1 419 aaKnown RBP17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 CPT1CQ8TCG5 803 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 UBTD2Q8WUN7 234 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 METTL21AQ8WXB1 218 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 PAFAH2Q99487 392 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 RBCK1Q9BYM8 510 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 RIC8BQ9NVN3 520 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 SCN2AQ99250 2005 aa17.43■□□□□ 0.38
SHKBP1-202ENST00000593764 SHANK1Q9Y566 2161 aa17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 IGHV3-20A0A0C4DH32 117 aa17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 CCDC189A1A4V9 331 aa17.42■□□□□ 0.38
SHKBP1-202ENST00000593764 URADA6NGE7 173 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms