RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SHISA5Q8N114 240 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 HORMAD2Q8N7B1 307 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 KCT2Q8NC54 265 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 SPATA4Q8NEY3 305 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 M1APQ8TC57 530 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 THAP11Q96EK4 314 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 PEX11GQ96HA9 241 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 FRMD6Q96NE9 622 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 KRT12Q99456 494 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 NDNQ99608 321 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 LPAR4Q99677 370 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 MMP25Q9NPA2 562 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 TRMT6Q9UJA5 497 aaKnown RBP13.87□□□□□ -0.19
PNKP-202ENST00000593706 NPIPA1Q9UND3 350 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 CHMP2BQ9UQN3 213 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 NAALAD2Q9Y3Q0 740 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 MTORP42345 2549 aa13.87□□□□□ -0.19
PNKP-202ENST00000593706 MAP1AP78559 2803 aaPredicted RBP13.86□□□□□ -0.19
PNKP-202ENST00000593706 WISP2O76076 250 aa13.86□□□□□ -0.19
PNKP-202ENST00000593706 TSPAN12O95859 305 aa13.86□□□□□ -0.19
PNKP-202ENST00000593706 SSTR2P30874 369 aa13.86□□□□□ -0.19
PNKP-202ENST00000593706 PAFAH1B1P43034 410 aa13.86□□□□□ -0.19
PNKP-202ENST00000593706 CSNK1G2P78368 415 aa13.86□□□□□ -0.19
PNKP-202ENST00000593706 MRPS25P82663 173 aaKnown RBP13.86□□□□□ -0.19
PNKP-202ENST00000593706 HP1BP3Q5SSJ5 553 aaPredicted RBP13.86□□□□□ -0.19
PNKP-202ENST00000593706 CAPN13Q6MZZ7 669 aaPredicted RBP13.86□□□□□ -0.19
PNKP-202ENST00000593706 LRRC8EQ6NSJ5 796 aa13.86□□□□□ -0.19
PNKP-202ENST00000593706 MBOAT1Q6ZNC8 495 aa13.86□□□□□ -0.19
PNKP-202ENST00000593706 ZNF572Q7Z3I7 529 aaPredicted RBP13.86□□□□□ -0.19
PNKP-202ENST00000593706 GALNTL5Q7Z4T8 443 aa13.86□□□□□ -0.19
PNKP-202ENST00000593706 SLC26A11Q86WA9 606 aa13.86□□□□□ -0.19
PNKP-202ENST00000593706 PDSS2Q86YH6 399 aa13.86□□□□□ -0.19
PNKP-202ENST00000593706 PALM2Q8IXS6 379 aa13.86□□□□□ -0.19
PNKP-202ENST00000593706 SLC13A3Q8WWT9 602 aa13.86□□□□□ -0.19
PNKP-202ENST00000593706 MTFMTQ96DP5 389 aaKnown RBP13.86□□□□□ -0.19
PNKP-202ENST00000593706 SCMH1Q96GD3 660 aa13.86□□□□□ -0.19
PNKP-202ENST00000593706 NPAS2Q99743 824 aa13.86□□□□□ -0.19
PNKP-202ENST00000593706 FAM129AQ9BZQ8 928 aa13.86□□□□□ -0.19
PNKP-202ENST00000593706 SH2B3Q9UQQ2 575 aa13.86□□□□□ -0.19
PNKP-202ENST00000593706 MEMO1Q9Y316 297 aa13.86□□□□□ -0.19
PNKP-202ENST00000593706 NF1P21359 2839 aa13.86□□□□□ -0.19
PNKP-202ENST00000593706 ASPDHA6ND91 283 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 PABPN1LA6NDY0 278 aaKnown RBP13.85□□□□□ -0.19
PNKP-202ENST00000593706 EFCAB8A8MWE9 144 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 C19orf84I3L1E1 186 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 NDC80O14777 642 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 NDUFS4O43181 175 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 MAN1A2O60476 641 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 CDH1P12830 882 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 ZNF24P17028 368 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 CCND1P24385 295 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 ARL4CP56559 192 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 OR4D2P58180 307 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 SKP1P63208 163 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 USP10Q14694 798 aaKnown RBP13.85□□□□□ -0.19
PNKP-202ENST00000593706 MAPKAPK3Q16644 382 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 Q6ZPB1 254 aaPredicted RBP13.85□□□□□ -0.19
PNKP-202ENST00000593706 CEP97Q8IW35 865 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 GHDCQ8N2G8 530 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 TSLPQ969D9 159 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 CFAP36Q96G28 342 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 CCDC138Q96M89 665 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 OR1F2PQ96R84 312 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 MCMBPQ9BTE3 642 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 TRIM31Q9BZY9 425 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 ATG10Q9H0Y0 220 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 MOCS1Q9NZB8 636 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 GRHL1Q9NZI5 618 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 LRFN1Q9P244 771 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 ADAMTS6Q9UKP5 1117 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 ZNF835Q9Y2P0 537 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 PSAT1Q9Y617 370 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 ITPR3Q14573 2671 aa13.85□□□□□ -0.19
PNKP-202ENST00000593706 FAM187AA6NFU0 413 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 MAGEB17A8MXT2 336 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 RAD51CO43502 376 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 SLC25A12O75746 678 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 SERPIND1P05546 499 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 C8GP07360 202 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 SP1P08047 785 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 IL10P22301 178 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 JAK1P23458 1154 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 RGS4P49798 205 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 SLC26A5P58743 744 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 HSF1Q00613 529 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 RHAGQ02094 409 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 HERC3Q15034 1050 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 DUPD1Q68J44 220 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 UGT3A1Q6NUS8 523 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 AGTRAPQ6RW13 159 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 PAQR3Q6TCH7 311 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 NCCRP1Q6ZVX7 275 aaPredicted RBP13.84□□□□□ -0.19
PNKP-202ENST00000593706 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.84□□□□□ -0.19
PNKP-202ENST00000593706 MYO1HQ8N1T3 1032 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 PIAS4Q8N2W9 510 aaPredicted RBP13.84□□□□□ -0.19
PNKP-202ENST00000593706 OR5T3Q8NGG3 340 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 ADAMTS18Q8TE60 1221 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 AGAP11Q8TF27 550 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 CHTF18Q8WVB6 975 aa13.84□□□□□ -0.19
PNKP-202ENST00000593706 EEF1AKMT1Q8WVE0 214 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms