RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 MBD6Q96DN6 1003 aa11.92□□□□□ -0.5
PRKCSH-210ENST00000589990 TM4SF19Q96DZ7 209 aa11.92□□□□□ -0.5
PRKCSH-210ENST00000589990 DESI2Q9BSY9 194 aa11.92□□□□□ -0.5
PRKCSH-210ENST00000589990 SLC6A16Q9GZN6 736 aa11.92□□□□□ -0.5
PRKCSH-210ENST00000589990 ETNK1Q9HBU6 452 aa11.92□□□□□ -0.5
PRKCSH-210ENST00000589990 RIMKLBQ9ULI2 386 aa11.92□□□□□ -0.5
PRKCSH-210ENST00000589990 MRFAP1Q9Y605 127 aa11.92□□□□□ -0.5
PRKCSH-210ENST00000589990 MPDZO75970 2070 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 A6NNC1 897 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 G3V3Y1 287 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 KLRC4-KLRK1H3BQV0 150 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 B4GALT2O60909 372 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 LY6G6DO95868 133 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 ACVR2AP27037 513 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 ARNTP27540 789 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 PCSK6P29122 969 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 HOXC12P31275 282 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 KIR2DL3P43628 341 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 ZFP36L2P47974 494 aaKnown RBP11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 TTPAP49638 278 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 NAP1L1P55209 391 aaKnown RBP11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 ARHGAP19Q14CB8 494 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 DEFB113Q30KQ7 82 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 AARS2Q5JTZ9 985 aaKnown RBP11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 PPP1R21Q6ZMI0 780 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 CHSY3Q70JA7 882 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 SLC26A11Q86WA9 606 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 CYP4Z2PQ8N1L4 340 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 TXLNBQ8N3L3 684 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 CNPPD1Q9BV87 410 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 ANKHQ9HCJ1 492 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 TRMT1Q9NXH9 659 aaKnown RBP11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 ANAPC5Q9UJX4 755 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 ZNF223Q9UK11 482 aaPredicted RBP11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 CBLCQ9ULV8 474 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 REXO2Q9Y3B8 237 aaKnown RBP11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 DUSP10Q9Y6W6 482 aa11.91□□□□□ -0.5
PRKCSH-210ENST00000589990 KPNA5O15131 536 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 PSMD3O43242 534 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 PRKNO60260 465 aaPredicted RBP11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 NDUFS3O75489 264 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 TJP3O95049 919 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 CCNDBP1O95273 360 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 SYF2O95926 243 aaKnown RBP11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 HEXAP06865 529 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 FHP07954 510 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 CELA3AP09093 270 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 ETS1P14921 441 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 MAOAP21397 527 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 NMBRP28336 390 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 PPARGP37231 505 aaPredicted RBP11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 PPIAP62937 165 aaKnown RBP11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 KIF5AQ12840 1032 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 KCTD19Q17RG1 926 aaPredicted RBP11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 THEMIS2Q5TEJ8 643 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 CES3Q6UWW8 571 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 CXXC5Q7LFL8 322 aaKnown RBP11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 WDR53Q7Z5U6 358 aaPredicted RBP11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 REXO1L1PQ8IX06 675 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 ARMC10Q8N2F6 343 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 CIARTQ8N365 385 aaPredicted RBP11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 GOT1L1Q8NHS2 421 aaPredicted RBP11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 GIMAP7Q8NHV1 300 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 SLC35B2Q8TB61 432 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 MCOLN3Q8TDD5 553 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 NUDT8Q8WV74 236 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 ATG4AQ8WYN0 398 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 LPGAT1Q92604 370 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 PDLIM2Q96JY6 352 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 SMC6Q96SB8 1091 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 LIN28AQ9H9Z2 209 aaKnown RBP11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 SLC24A3Q9HC58 644 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 TREX1Q9NSU2 369 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 KCMF1Q9P0J7 381 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 CRYL1Q9Y2S2 319 aa11.9□□□□□ -0.5
PRKCSH-210ENST00000589990 KCNE1BA0A087WTH5 132 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 TRBV11-1A0A0K0K1C0 115 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 SAGE2PA6NJ88 616 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 CHST10O43529 356 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 ITGA10O75578 1167 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 RAF1P04049 648 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 IMPA1P29218 277 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 ATP5DP30049 168 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 UQCRC1P31930 480 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 RPS15AP62244 130 aaKnown RBP11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 ABATP80404 500 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 CCZ1BP86790 482 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 CCZ1P86791 482 aaPredicted RBP11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 MPP1Q00013 466 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 CUL1Q13616 776 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 B3GNT6Q6ZMB0 384 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 ASPGQ86U10 573 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 VWA5B2Q8N398 1253 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 APCDD1LQ8NCL9 501 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 ZNF740Q8NDX6 193 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 TBC1D20Q96BZ9 403 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 PTCHD1Q96NR3 888 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 OR1F2PQ96R84 312 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 DEFB126Q9BYW3 111 aa11.89□□□□□ -0.51
PRKCSH-210ENST00000589990 LACRTQ9GZZ8 138 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms