RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 CRNNQ9UBG3 495 aaPredicted RBP17.88■□□□□ 0.45
DDX39A-206ENST00000587730 PNMA8BQ9ULN7 279 aaPredicted RBP17.88■□□□□ 0.45
DDX39A-206ENST00000587730 ERVK-11Q9UQG0 969 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 INSL5Q9Y5Q6 135 aa17.88■□□□□ 0.45
DDX39A-206ENST00000587730 HAT1O14929 419 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 ASNA1O43681 348 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 PARNO95453 639 aaKnown RBP17.87■□□□□ 0.45
DDX39A-206ENST00000587730 PABPC1P11940 636 aaKnown RBP17.87■□□□□ 0.45
DDX39A-206ENST00000587730 CD22P20273 847 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 HOXD10P28358 340 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 PIK3CBP42338 1070 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 MAGEA10P43363 369 aaPredicted RBP17.87■□□□□ 0.45
DDX39A-206ENST00000587730 RGS6P49758 472 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 HMGA2P52926 109 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 CRYBA2P53672 197 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 SPIBQ01892 262 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 MAPK11Q15759 364 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 GALNT10Q86SR1 603 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 SLC44A2Q8IWA5 706 aaPredicted RBP17.87■□□□□ 0.45
DDX39A-206ENST00000587730 LGI4Q8N135 537 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 OR56A3Q8NH54 315 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 TMEM159Q96B96 161 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 SLC22A12Q96S37 553 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 MYOCQ99972 504 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 CCDC32Q9BV29 185 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 VN1R3Q9BXE9 311 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 FAM83DQ9H4H8 585 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 REEP4Q9H6H4 257 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 NPAP1Q9NZP6 1156 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 B4GALT6Q9UBX8 382 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 KCNE2Q9Y6J6 123 aa17.87■□□□□ 0.45
DDX39A-206ENST00000587730 GNG14A0A1W2PPG7 69 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 E7EQ34 232 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 FOXE1O00358 373 aaPredicted RBP17.86■□□□□ 0.45
DDX39A-206ENST00000587730 SGTAO43765 313 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 TNFRSF21O75509 655 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 ADORA3P0DMS8 318 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 GABRB1P18505 474 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 CD70P32970 193 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 UGT2B15P54855 530 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 RAE1P78406 368 aaKnown RBP17.86■□□□□ 0.45
DDX39A-206ENST00000587730 ZNF763Q0D2J5 394 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 DDX39BQ13838 428 aaKnown RBP17.86■□□□□ 0.45
DDX39A-206ENST00000587730 CRB2Q5IJ48 1285 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 SPANXN2Q5MJ10 180 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 DEPDC1Q5TB30 811 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 MED27Q6P2C8 311 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 KRT73Q86Y46 540 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 NAGSQ8N159 534 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 TRAM1L1Q8N609 369 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 FLCNQ8NFG4 579 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 UBE2FQ969M7 185 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 PIP5K1AQ99755 562 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 ZSCAN5AQ9BUG6 496 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 STOX2Q9P2F5 926 aaPredicted RBP17.86■□□□□ 0.45
DDX39A-206ENST00000587730 TMPRSS11EQ9UL52 423 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 DUSP12Q9UNI6 340 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 HCN4Q9Y3Q4 1203 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.86■□□□□ 0.45
DDX39A-206ENST00000587730 CCDC85CA6NKD9 419 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 TTC36A6NLP5 189 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 ARHGEF33A8MVX0 844 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 SNPHO15079 494 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 KRT75O95678 551 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 VIPP01282 170 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 PIPP12273 146 aaPredicted RBP17.86■□□□□ 0.45
DDX39A-206ENST00000587730 C21orf33P30042 268 aaPredicted RBP17.86■□□□□ 0.45
DDX39A-206ENST00000587730 VIPR1P32241 457 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 CRATP43155 626 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 PRIM2P49643 509 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 LIMK1P53667 647 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 GAB1Q13480 694 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 SCARB2Q14108 478 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 ARMCX4Q5H9R4 360 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 COLEC12Q5KU26 742 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.86■□□□□ 0.45
DDX39A-206ENST00000587730 STEAP3Q658P3 488 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 TMEM53Q6P2H8 277 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 UNC5DQ6UXZ4 953 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 TRIM69Q86WT6 500 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 FBXO15Q8NCQ5 510 aaPredicted RBP17.86■□□□□ 0.45
DDX39A-206ENST00000587730 OR7G3Q8NG95 312 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 BHMTQ93088 406 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 CTRCQ99895 268 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 CDADC1Q9BWV3 514 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 BBS2Q9BXC9 721 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 IL21Q9HBE4 155 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 CFAP97Q9P2B7 532 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 SRRDQ9UH36 339 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 ANGPT4Q9Y264 503 aa17.86■□□□□ 0.45
DDX39A-206ENST00000587730 A0A075B6Q4 140 aa17.85■□□□□ 0.45
DDX39A-206ENST00000587730 WASH3PC4AMC7 463 aa17.85■□□□□ 0.45
DDX39A-206ENST00000587730 YY2O15391 372 aa17.85■□□□□ 0.45
DDX39A-206ENST00000587730 TBX1O43435 398 aa17.85■□□□□ 0.45
DDX39A-206ENST00000587730 PCDH7O60245 1069 aa17.85■□□□□ 0.45
DDX39A-206ENST00000587730 DLGAP3O95886 979 aa17.85■□□□□ 0.45
DDX39A-206ENST00000587730 CKMP06732 381 aa17.85■□□□□ 0.45
DDX39A-206ENST00000587730 NUDT7P0C024 238 aa17.85■□□□□ 0.45
DDX39A-206ENST00000587730 DBTP11182 482 aaKnown RBP17.85■□□□□ 0.45
DDX39A-206ENST00000587730 SLC19A1P41440 591 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms