RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 SPG11Q96JI7 2443 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 GOLGA6L10A0A0M3HER8 536 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 TRBC2A0A5B9 178 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 ASPDHA6ND91 283 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 FAM227AF5H4B4 570 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 TTI1O43156 1089 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 CHST10O43529 356 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 GUCA1CO95843 209 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 SERPIND1P05546 499 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 ZNF888P0CJ79 500 aaPredicted RBP13.15□□□□□ -0.3
ATG4D-206ENST00000586863 ALOX12P18054 663 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 IL10P22301 178 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 SCTRP47872 440 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 AP1S2P56377 157 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 OR4D2P58180 307 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 SLC26A5P58743 744 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 IL2P60568 153 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 ADORA2A-AS1P86434 159 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 RBPJQ06330 500 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 PDAP1Q13442 181 aaKnown RBP13.15□□□□□ -0.3
ATG4D-206ENST00000586863 PWP1Q13610 501 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 NAA30Q147X3 362 aaPredicted RBP13.15□□□□□ -0.3
ATG4D-206ENST00000586863 BBS9Q3SYG4 887 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 TEDDM1Q5T9Z0 273 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 HECTD2Q5U5R9 776 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 ZNF468Q5VIY5 522 aaPredicted RBP13.15□□□□□ -0.3
ATG4D-206ENST00000586863 TRMT10BQ6PF06 316 aaKnown RBP13.15□□□□□ -0.3
ATG4D-206ENST00000586863 RPTNQ6XPR3 784 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 BNC2Q6ZN30 1099 aaPredicted RBP13.15□□□□□ -0.3
ATG4D-206ENST00000586863 GALNT7Q86SF2 657 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 SLC5A8Q8N695 610 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 SLC5A11Q8WWX8 675 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 NEIL2Q969S2 332 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 FBXL8Q96CD0 374 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 GPR137Q96N19 417 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 PWWP2AQ96N64 755 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 TSNARE1Q96NA8 513 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 FRMD6Q96NE9 622 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 PYCARDQ9ULZ3 195 aa13.15□□□□□ -0.3
ATG4D-206ENST00000586863 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.15□□□□□ -0.3
ATG4D-206ENST00000586863 INTS1Q8N201 2190 aaKnown RBP13.14□□□□□ -0.31
ATG4D-206ENST00000586863 NPIPA5E9PKD4 350 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 B4GALT2O60909 372 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 NEURL1O76050 574 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 CD46P15529 392 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 HTR1EP28566 365 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 EEF1DP29692 281 aaKnown RBP13.14□□□□□ -0.31
ATG4D-206ENST00000586863 REEP5Q00765 189 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 ALDH6A1Q02252 535 aaKnown RBP13.14□□□□□ -0.31
ATG4D-206ENST00000586863 OC90Q02509 493 aaPredicted RBP13.14□□□□□ -0.31
ATG4D-206ENST00000586863 RGS1Q08116 209 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 ZNF630Q2M218 657 aaPredicted RBP13.14□□□□□ -0.31
ATG4D-206ENST00000586863 HP1BP3Q5SSJ5 553 aaPredicted RBP13.14□□□□□ -0.31
ATG4D-206ENST00000586863 MTFR2Q6P444 385 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 SBSNQ6UWP8 590 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 GALNTL5Q7Z4T8 443 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 STRA8Q7Z7C7 330 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 SIAH3Q8IW03 269 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 LGI4Q8N135 537 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 GABPB2Q8TAK5 448 aaPredicted RBP13.14□□□□□ -0.31
ATG4D-206ENST00000586863 NT5CQ8TCD5 201 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 ELP5Q8TE02 316 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 UTP15Q8TED0 518 aaKnown RBP13.14□□□□□ -0.31
ATG4D-206ENST00000586863 THAP3Q8WTV1 239 aaPredicted RBP13.14□□□□□ -0.31
ATG4D-206ENST00000586863 CFAP36Q96G28 342 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 MAGED4Q96JG8 741 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 NAT9Q9BTE0 207 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 CDCP1Q9H5V8 836 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 PPANQ9NQ55 473 aaKnown RBP13.14□□□□□ -0.31
ATG4D-206ENST00000586863 ZFP69BQ9UJL9 534 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 SNX12Q9UMY4 172 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 NPIPA1Q9UND3 350 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 CHMP2BQ9UQN3 213 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 MTORP42345 2549 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 HIVEP1P15822 2718 aa13.14□□□□□ -0.31
ATG4D-206ENST00000586863 PABPN1LA6NDY0 278 aaKnown RBP13.13□□□□□ -0.31
ATG4D-206ENST00000586863 C4orf51C9J302 202 aa13.13□□□□□ -0.31
ATG4D-206ENST00000586863 NDC80O14777 642 aa13.13□□□□□ -0.31
ATG4D-206ENST00000586863 ZNHIT1O43257 154 aa13.13□□□□□ -0.31
ATG4D-206ENST00000586863 SNRPB2P08579 225 aaKnown RBP13.13□□□□□ -0.31
ATG4D-206ENST00000586863 ENO2P09104 434 aaPredicted RBP13.13□□□□□ -0.31
ATG4D-206ENST00000586863 JAK1P23458 1154 aa13.13□□□□□ -0.31
ATG4D-206ENST00000586863 IVDP26440 423 aa13.13□□□□□ -0.31
ATG4D-206ENST00000586863 HNF4AP41235 474 aa13.13□□□□□ -0.31
ATG4D-206ENST00000586863 ELK3P41970 407 aa13.13□□□□□ -0.31
ATG4D-206ENST00000586863 CASP6P55212 293 aa13.13□□□□□ -0.31
ATG4D-206ENST00000586863 TAS2R50P59544 299 aa13.13□□□□□ -0.31
ATG4D-206ENST00000586863 GNG11P61952 73 aa13.13□□□□□ -0.31
ATG4D-206ENST00000586863 BTG2P78543 158 aa13.13□□□□□ -0.31
ATG4D-206ENST00000586863 HYAL2Q12891 473 aa13.13□□□□□ -0.31
ATG4D-206ENST00000586863 CSHL1Q14406 222 aa13.13□□□□□ -0.31
ATG4D-206ENST00000586863 CDSNQ15517 529 aa13.13□□□□□ -0.31
ATG4D-206ENST00000586863 PPP1R3AQ16821 1122 aa13.13□□□□□ -0.31
ATG4D-206ENST00000586863 FAM45BPQ6NSW5 357 aa13.13□□□□□ -0.31
ATG4D-206ENST00000586863 QSOX2Q6ZRP7 698 aa13.13□□□□□ -0.31
ATG4D-206ENST00000586863 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.13□□□□□ -0.31
ATG4D-206ENST00000586863 TMPRSS11BQ86T26 416 aa13.13□□□□□ -0.31
ATG4D-206ENST00000586863 RPS19BP1Q86WX3 136 aaKnown RBP13.13□□□□□ -0.31
ATG4D-206ENST00000586863 ANKRD53Q8N9V6 530 aa13.13□□□□□ -0.31
ATG4D-206ENST00000586863 TMEM178AQ8NBL3 297 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms