RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 CEP128Q6ZU80 1094 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 SULF2Q8IWU5 870 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 RNF10Q8N5U6 811 aaKnown RBP11.12□□□□□ -0.63
BRCA1-225ENST00000586385 HORMAD2Q8N7B1 307 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 FAM98AQ8NCA5 519 aaKnown RBP11.12□□□□□ -0.63
BRCA1-225ENST00000586385 ABHD11Q8NFV4 315 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 OR4K1Q8NGD4 311 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 LILRB4Q8NHJ6 448 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 ZNF669Q96BR6 464 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-225ENST00000586385 TBC1D20Q96BZ9 403 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 OR4K3Q96R72 315 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 SARGQ9BW04 601 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 AICDAQ9GZX7 198 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 PLSCR2Q9NRY7 297 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 ZNF223Q9UK11 482 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-225ENST00000586385 RNF6Q9Y252 685 aa11.12□□□□□ -0.63
BRCA1-225ENST00000586385 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.11□□□□□ -0.63
BRCA1-225ENST00000586385 FAM237BA0A1B0GVD1 139 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 SAGE2PA6NJ88 616 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 PFDN6O15212 129 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 HS6ST1O60243 411 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 B4GALT2O60909 372 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 HAUS5O94927 633 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 TPOP07202 933 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 HOXB4P17483 251 aaPredicted RBP11.11□□□□□ -0.63
BRCA1-225ENST00000586385 TFEBP19484 476 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 MAOAP21397 527 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 PTGS2P35354 604 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 CYB561P49447 251 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 NAE1Q13564 534 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 C4orf22Q6V702 233 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 MDGA2Q7Z553 956 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 C17orf64Q86WR6 236 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 CCDC71Q8IV32 467 aaPredicted RBP11.11□□□□□ -0.63
BRCA1-225ENST00000586385 DMRTC2Q8IXT2 367 aaPredicted RBP11.11□□□□□ -0.63
BRCA1-225ENST00000586385 ZFP62Q8NB50 900 aaPredicted RBP11.11□□□□□ -0.63
BRCA1-225ENST00000586385 APCDD1LQ8NCL9 501 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 C16orf52Q8NHV5 167 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 EEF1AKMT1Q8WVE0 214 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 AARSD1Q9BTE6 412 aaKnown RBP11.11□□□□□ -0.63
BRCA1-225ENST00000586385 PCBD2Q9H0N5 130 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 RBSNQ9H1K0 784 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 NECTIN3Q9NQS3 549 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 DEPPQ9NTK1 212 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 VPS9D1Q9Y2B5 631 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 CLDN16Q9Y5I7 305 aa11.11□□□□□ -0.63
BRCA1-225ENST00000586385 TCRBV16S1A1N1A0A5B0 115 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 CTAGE9A4FU28 777 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 PINLYPA6NC86 204 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 FAM90A27PA6NNH2 459 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 EIF3FO00303 357 aaPredicted RBP11.1□□□□□ -0.63
BRCA1-225ENST00000586385 CDK2AP1O14519 115 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 FANCGO15287 622 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 NDUFS4O43181 175 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 PEX1O43933 1283 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 FGGP02679 453 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 ZNF888P0CJ79 500 aaPredicted RBP11.1□□□□□ -0.63
BRCA1-225ENST00000586385 ALOX12P18054 663 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 PAMP19021 973 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 MSX1P28360 303 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 GABRB3P28472 473 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 MAGEA3P43357 314 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 VPS41P49754 854 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 PGGT1BP53609 377 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 GPR85P60893 370 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 DHX9Q08211 1270 aaKnown RBP11.1□□□□□ -0.63
BRCA1-225ENST00000586385 HYAL2Q12891 473 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 HERC3Q15034 1050 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 ARMC3Q5W041 872 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 TTC27Q6P3X3 843 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 LCTLQ6UWM7 567 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 QSOX2Q6ZRP7 698 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 GSTA5Q7RTV2 222 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 CYP4X1Q8N118 509 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 POGLUT1Q8NBL1 392 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 OR52N2Q8NGI0 321 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 UTP15Q8TED0 518 aaKnown RBP11.1□□□□□ -0.63
BRCA1-225ENST00000586385 PYCR2Q96C36 320 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 PTCHD1Q96NR3 888 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 NDNQ99608 321 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 TMUB1Q9BVT8 246 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 TSGA10Q9BZW7 698 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 FBXO5Q9UKT4 447 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 GUCA1BQ9UMX6 200 aa11.1□□□□□ -0.63
BRCA1-225ENST00000586385 PRRC2AP48634 2157 aaKnown RBP11.1□□□□□ -0.63
BRCA1-225ENST00000586385 A0A0G2JMM0 328 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 A0A1W2PPB8 328 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 A0A1W2PRS3 328 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 TRBC2A0A5B9 178 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 TMEM200CA6NKL6 621 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 A8MUA0 341 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 KIR3DP1A8MWS1 328 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 TGFBR3LH3BV60 316 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 TFECO14948 347 aaPredicted RBP11.09□□□□□ -0.63
BRCA1-225ENST00000586385 OR1F1O43749 312 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 PRKNO60260 465 aaPredicted RBP11.09□□□□□ -0.63
BRCA1-225ENST00000586385 CEP104O60308 925 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 PDE9AO76083 593 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 SLC35G6P0C7Q6 338 aa11.09□□□□□ -0.63
BRCA1-225ENST00000586385 SMIM10L1P0DMW3 83 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms