RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 SMPD3Q9NY59 655 aaPredicted RBP10.8□□□□□ -0.68
LIG3-204ENST00000585740 UBAP1Q9NZ09 502 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 SUFUQ9UMX1 484 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.8□□□□□ -0.68
LIG3-204ENST00000585740 GPSM3Q9Y4H4 160 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 COLEC10Q9Y6Z7 277 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 V9GYQ6 96 aa10.8□□□□□ -0.68
LIG3-204ENST00000585740 SMIM31A0A1B0GVY4 71 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 VGLL3A8MV65 326 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 H0YAE9 185 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 GNGT2O14610 69 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 CLEC3AO75596 197 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 PRKD3O94806 890 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 KRT75O95678 551 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 SERPINA1P01009 418 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 CST1P01037 141 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 LINGO3P0C6S8 592 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 MYF6P23409 242 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 HTR1BP28222 390 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 GRK3P35626 688 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 CAPGP40121 348 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 ALDH3A2P51648 485 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 TRA2BP62995 288 aaKnown RBP10.79□□□□□ -0.68
LIG3-204ENST00000585740 MYBPC1Q00872 1141 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 MEF2AQ02078 507 aaPredicted RBP10.79□□□□□ -0.68
LIG3-204ENST00000585740 PRDX1Q06830 199 aaKnown RBP10.79□□□□□ -0.68
LIG3-204ENST00000585740 RBBP4Q09028 425 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 DAG1Q14118 895 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 NFATC4Q14934 902 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 TEAD4Q15561 434 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 SLC36A3Q495N2 470 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 KHDRBS2Q5VWX1 349 aaKnown RBP10.79□□□□□ -0.68
LIG3-204ENST00000585740 ADNP2Q6IQ32 1131 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 ZCCHC8Q6NZY4 707 aaKnown RBP10.79□□□□□ -0.68
LIG3-204ENST00000585740 WASH2PQ6VEQ5 465 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 SLC30A8Q8IWU4 369 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 ZZZ3Q8IYH5 903 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 CLECL1Q8IZS7 167 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 ZCCHC7Q8N3Z6 543 aaKnown RBP10.79□□□□□ -0.68
LIG3-204ENST00000585740 OR5K1Q8NHB7 308 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 WDR48Q8TAF3 677 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 ZFP90Q8TF47 636 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 TMBIM1Q969X1 311 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 AURKBQ96GD4 344 aaPredicted RBP10.79□□□□□ -0.68
LIG3-204ENST00000585740 ZNF764Q96H86 408 aaPredicted RBP10.79□□□□□ -0.68
LIG3-204ENST00000585740 WDR92Q96MX6 357 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 ASPSCR1Q9BZE9 553 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 SPNS1Q9H2V7 528 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 EPB41L1Q9H4G0 881 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 TMEM184CQ9NVA4 438 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 SPASTQ9UBP0 616 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 MOSPD1Q9UJG1 213 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 KCNK6Q9Y257 313 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 MYRFQ9Y2G1 1151 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 USP34Q70CQ2 3546 aa10.79□□□□□ -0.68
LIG3-204ENST00000585740 A0A1W2PPV9 198 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 TRBC2A0A5B9 178 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 C1orf226A1L170 272 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 PRSS38A1L453 326 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 PDZK1P1A8MUH7 402 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 PDLIM1O00151 329 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 EI24O14681 340 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 TNFRSF10CO14798 259 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 SLC31A1O15431 190 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 CAPN5O15484 640 aaPredicted RBP10.78□□□□□ -0.68
LIG3-204ENST00000585740 SH3BGRLO75368 114 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 KCNK5O95279 499 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 ALBP02768 609 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 KLK1P06870 262 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 HNRNPA2B1P22626 353 aaKnown RBP10.78□□□□□ -0.68
LIG3-204ENST00000585740 RPL10P27635 214 aaKnown RBP10.78□□□□□ -0.68
LIG3-204ENST00000585740 KDELR2P33947 212 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 PCGF2P35227 344 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 RPL5P46777 297 aaKnown RBP10.78□□□□□ -0.68
LIG3-204ENST00000585740 ARFIP1P53367 373 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 TAS2R50P59544 299 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 YPEL5P62699 121 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 ZP2Q05996 745 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 FADDQ13158 208 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 ELOAQ14241 798 aaKnown RBP10.78□□□□□ -0.68
LIG3-204ENST00000585740 SF1Q15637 639 aaKnown RBP10.78□□□□□ -0.68
LIG3-204ENST00000585740 MLF2Q15773 248 aaPredicted RBP10.78□□□□□ -0.68
LIG3-204ENST00000585740 LIN52Q52LA3 116 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 TMEM35AQ53FP2 167 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 CCNYL2Q5T2Q4 361 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 ENPP6Q6UWR7 440 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 KIAA1324Q6UXG2 1013 aaKnown RBP10.78□□□□□ -0.68
LIG3-204ENST00000585740 EIF3MQ7L2H7 374 aaKnown RBP10.78□□□□□ -0.68
LIG3-204ENST00000585740 VN1R5Q7Z5H4 357 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 HIPK1Q86Z02 1210 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 ZDHHC13Q8IUH4 622 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 SYNPOQ8N3V7 929 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 OR52N2Q8NGI0 321 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 ZFP28Q8NHY6 868 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 NETO1Q8TDF5 533 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 RGMAQ96B86 450 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 RMND5BQ96G75 393 aaPredicted RBP10.78□□□□□ -0.68
LIG3-204ENST00000585740 ACAT2Q9BWD1 397 aa10.78□□□□□ -0.68
LIG3-204ENST00000585740 YTHDF1Q9BYJ9 559 aaKnown RBP10.78□□□□□ -0.68
LIG3-204ENST00000585740 KIR3DX1Q9H7L2 352 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms