RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 PYGBP11216 843 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 KRT15P19012 456 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 PIK3CBP42338 1070 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 AGTR2P50052 363 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 SOX8P57073 446 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 CYP4F2P78329 520 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 MEF2AQ02078 507 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 DOC2AQ14183 400 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 RBBP7Q16576 425 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 TUBB8Q3ZCM7 444 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 CCDC153Q494R4 210 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 GGTA1PQ4G0N0 100 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 TMEM35AQ53FP2 167 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 SOWAHCQ53LP3 525 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 TCTN3Q6NUS6 607 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 TRIM40Q6P9F5 258 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 PTGR2Q8N8N7 351 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 ZNF740Q8NDX6 193 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 RDH11Q8TC12 318 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 RNF31Q96EP0 1072 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 FAR2Q96K12 515 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 ING2Q9H160 280 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 SLC25A18Q9H1K4 315 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 SPNS1Q9H2V7 528 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 SYNPO2LQ9H987 977 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 MKS1Q9NXB0 559 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 SENP1Q9P0U3 644 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 CTSFQ9UBX1 484 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 MAU2Q9Y6X3 613 aa13.09□□□□□ -0.31
PRKCSH-202ENST00000585540 LAMA5O15230 3695 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 BLACEA4D250 179 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 H0YIV9 168 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 ZZEF1O43149 2961 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 CNOT3O75175 753 aaKnown RBP13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 CEACAM4O75871 244 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 MED26O95402 600 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 OTCP00480 354 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 SERPIND1P05546 499 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 FURINP09958 794 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 SMIM10L1P0DMW3 83 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 IL1RNP18510 177 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 EPORP19235 508 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 VARSP26640 1264 aaKnown RBP13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 OTX2P32243 289 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 EMP2P54851 167 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 KLC1Q07866 573 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 ZNF844Q08AG5 666 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 AIMP2Q13155 320 aaKnown RBP13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 PCSK4Q6UW60 755 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 CHSY3Q70JA7 882 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 TEX9Q8N6V9 391 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 L3MBTL4Q8NA19 623 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 KCT2Q8NC54 265 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 OR2L5Q8NG80 312 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 OR9A4Q8NGU2 314 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 OR51Q1Q8NH59 317 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 C9orf43Q8TAL5 461 aaPredicted RBP13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 ZCCHC10Q8TBK6 192 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 UTP15Q8TED0 518 aaKnown RBP13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 METTL21AQ8WXB1 218 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 ESAMQ96AP7 390 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 CMTM7Q96FZ5 175 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 SMIM10Q96HG1 83 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 ZIM3Q96PE6 472 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 TMEM109Q9BVC6 243 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 ACTR8Q9H981 624 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 ATP13A2Q9NQ11 1180 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 RIC8BQ9NVN3 520 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 P4HTMQ9NXG6 502 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 LGALS13Q9UHV8 139 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 C3orf18Q9UK00 162 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 GRID1Q9ULK0 1009 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 NAALAD2Q9Y3Q0 740 aa13.08□□□□□ -0.32
PRKCSH-202ENST00000585540 LOC102723996A0A087X1L8 192 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 LRIT2A6NDA9 550 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 BMP10O95393 424 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 CLDN9O95484 217 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 HPP00738 406 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 HEXBP07686 556 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 ICAM2P13598 275 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 ACPPP15309 386 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 ATP5F1P24539 256 aaPredicted RBP13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 EEF1DP29692 281 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 CRHR1P34998 444 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 HERVK_113P63132 956 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 ATP1A4Q13733 1029 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 KRT71Q3SY84 523 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 DCAF10Q5QP82 559 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 ATP1A1-AS1Q5TC04 95 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 IRAK1BP1Q5VVH5 260 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 SH2D5Q6ZV89 423 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 GOLGA7Q7Z5G4 137 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 PPP1R32Q7Z5V6 425 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 ZC3H7AQ8IWR0 971 aaKnown RBP13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 C4orf33Q8N1A6 199 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 METTL27Q8N6F8 245 aaPredicted RBP13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 PLPP5Q8NEB5 264 aa13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.07□□□□□ -0.32
PRKCSH-202ENST00000585540 ATP6V1E2Q96A05 226 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms