RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 PRR35P0CG20 571 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 ICAM2P13598 275 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 PAFAH1B1P43034 410 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 EEF1A2Q05639 463 aaKnown RBP10.51□□□□□ -0.73
CCDC47-206ENST00000584112 CDC16Q13042 620 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 FRG1Q14331 258 aaKnown RBP10.51□□□□□ -0.73
CCDC47-206ENST00000584112 PHKG1Q16816 387 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 HECTD2Q5U5R9 776 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 STEAP4Q687X5 459 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 DUPD1Q68J44 220 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 HIST2H2BDQ6DRA6 164 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 HIBCHQ6NVY1 386 aaPredicted RBP10.51□□□□□ -0.73
CCDC47-206ENST00000584112 TMEM205Q6UW68 189 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 MBOAT1Q6ZNC8 495 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 VN1R4Q7Z5H5 301 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 ASPGQ86U10 573 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 CREG2Q8IUH2 290 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 SPNS2Q8IVW8 549 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 ZC3H7AQ8IWR0 971 aaKnown RBP10.51□□□□□ -0.73
CCDC47-206ENST00000584112 TBC1D19Q8N5T2 526 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 OR9A4Q8NGU2 314 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 ALKBH8Q96BT7 664 aaKnown RBP10.51□□□□□ -0.73
CCDC47-206ENST00000584112 CNDP1Q96KN2 507 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 TREX2Q9BQ50 279 aaPredicted RBP10.51□□□□□ -0.73
CCDC47-206ENST00000584112 SLX1AQ9BQ83 275 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 ZNF700Q9H0M5 742 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 ATG10Q9H0Y0 220 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 ANKHQ9HCJ1 492 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 ZFATQ9P243 1243 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 RNF14Q9UBS8 474 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 C19orf25Q9UFG5 118 aaPredicted RBP10.51□□□□□ -0.73
CCDC47-206ENST00000584112 ST6GALNAC2Q9UJ37 374 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 VWA7Q9Y334 891 aa10.51□□□□□ -0.73
CCDC47-206ENST00000584112 SVEP1Q4LDE5 3571 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 LOC102723996A0A087X1L8 192 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 DYTNA2CJ06 578 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 USP27XA6NNY8 438 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 WFS1O76024 890 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 KLHL18O94889 574 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 SEC31AO94979 1220 aaKnown RBP10.5□□□□□ -0.73
CCDC47-206ENST00000584112 TSPAN12O95859 305 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 C8orf89P0DMQ9 161 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 CDH1P12830 882 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 SOX11P35716 441 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 CCR8P51685 355 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 ITGA8P53708 1063 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 SKP1P63208 163 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 ARG2P78540 354 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 PPP2R2BQ00005 443 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 MAT1AQ00266 395 aaKnown RBP10.5□□□□□ -0.73
CCDC47-206ENST00000584112 MGAT5Q09328 741 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 ILF2Q12905 390 aaKnown RBP10.5□□□□□ -0.73
CCDC47-206ENST00000584112 SYT16Q17RD7 645 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 HP1BP3Q5SSJ5 553 aaPredicted RBP10.5□□□□□ -0.73
CCDC47-206ENST00000584112 MFSD4BQ5TF39 518 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 FAAH2Q6GMR7 532 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 TMEM214Q6NUQ4 689 aaKnown RBP10.5□□□□□ -0.73
CCDC47-206ENST00000584112 NIPAL1Q6NVV3 410 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 RPUSD3Q6P087 351 aaKnown RBP10.5□□□□□ -0.73
CCDC47-206ENST00000584112 TRMT10BQ6PF06 316 aaKnown RBP10.5□□□□□ -0.73
CCDC47-206ENST00000584112 LINC00696Q6ZRV3 163 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 ULK2Q8IYT8 1036 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 BRIX1Q8TDN6 353 aaKnown RBP10.5□□□□□ -0.73
CCDC47-206ENST00000584112 SLC13A3Q8WWT9 602 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 FBXL8Q96CD0 374 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 TM4SF19Q96DZ7 209 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 PDLIM5Q96HC4 596 aaKnown RBP10.5□□□□□ -0.73
CCDC47-206ENST00000584112 MESP1Q9BRJ9 268 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 TRIM51Q9BSJ1 452 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 TUBB6Q9BUF5 446 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 PLAC1Q9HBJ0 212 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 NSMCE4AQ9NXX6 385 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 PTGFRNQ9P2B2 879 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 SLC17A6Q9P2U8 582 aa10.5□□□□□ -0.73
CCDC47-206ENST00000584112 MRPS2Q9Y399 296 aaKnown RBP10.5□□□□□ -0.73
CCDC47-206ENST00000584112 FEZF1A0PJY2 475 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 EFCAB8A8MWE9 144 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 TTI1O43156 1089 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 STATHP02808 62 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 NPPBP16860 134 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 IL1RNP18510 177 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 IL10P22301 178 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 BCL6P41182 706 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 XCR1P46094 333 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 AGTR2P50052 363 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 PDIA2Q13087 525 aaKnown RBP10.49□□□□□ -0.73
CCDC47-206ENST00000584112 HERC3Q15034 1050 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 PCOLCEQ15113 449 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 INAQ16352 499 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 MINDY4Q4G0A6 757 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 FAM180AQ6UWF9 173 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 SLC26A11Q86WA9 606 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 NKAPQ8N5F7 415 aaKnown RBP10.49□□□□□ -0.73
CCDC47-206ENST00000584112 MFSD9Q8NBP5 474 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 BBOF1Q8ND07 529 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 ABHD11Q8NFV4 315 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 OR56A3Q8NH54 315 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 OR51Q1Q8NH59 317 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 ZCCHC10Q8TBK6 192 aa10.49□□□□□ -0.73
CCDC47-206ENST00000584112 TMEM158Q8WZ71 300 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms