RNA–Protein interactions for RNA: ENST00000582169.5

EIF4A1-223, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 4

Gene EIF4A1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-223	ENST00000582169	RPS13	P62277	151 aa	Known RBP	10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	SNRPN	P63162	240 aa	Known RBP	10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	CYP4F3	Q08477	520 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	CSTF3	Q12996	717 aa	Known RBP	10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	IFT88	Q13099	833 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	CUL3	Q13618	768 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	KIAA0040	Q15053	153 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	GPR19	Q15760	415 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	TBC1D25	Q3MII6	688 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	TCTE1	Q5JU00	501 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	DEPDC1	Q5TB30	811 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	SCIMP	Q6UWF3	145 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	UNQ6494/PRO21346	Q6UXR6	183 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	LARP4	Q71RC2	724 aa	Known RBP eCLIP	10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	UBE3D	Q7Z6J8	389 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	PIGW	Q7Z7B1	504 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	TMEM126B	Q8IUX1	230 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	ZNF655	Q8N720	491 aa	Predicted RBP	10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	RFWD2	Q8NHY2	731 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	GATA6	Q92908	595 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	ZNF501	Q96CX3	271 aa	Predicted RBP	10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	MTFMT	Q96DP5	389 aa	Known RBP	10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	C19orf60	Q96EN9	201 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	SMIM10	Q96HG1	83 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	HBEGF	Q99075	208 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	MTERF1	Q99551	399 aa	Known RBP	10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	SIKE1	Q9BRV8	207 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	ZNF717	Q9BY31	904 aa	Predicted RBP	10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	NLN	Q9BYT8	704 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	NUF2	Q9BZD4	464 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	ULBP3	Q9BZM4	244 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	ASCL3	Q9NQ33	180 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	LHX9	Q9NQ69	397 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	SIRT5	Q9NXA8	310 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	FIS1	Q9Y3D6	152 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169	FER1L5	A0AVI2	2057 aa		10.29	□□□□□ -0.76
EIF4A1-223	ENST00000582169		A0A1W2PNU3	283 aa	Predicted RBP	10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	C4orf51	C9J302	202 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	STMND1	H3BQB6	276 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	SLC28A1	O00337	649 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	TXNDC9	O14530	226 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	LSM1	O15116	133 aa	Known RBP	10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	ZSCAN9	O15535	394 aa	Predicted RBP	10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	SNX3	O60493	162 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	CPNE3	O75131	537 aa	Known RBP	10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	CRCP	O75575	148 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	SCRG1	O75711	98 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	SEMA3D	O95025	777 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	CHEK2	O96017	543 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	TGFB1	P01137	390 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	HBQ1	P09105	142 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	LINC00032	P0C843	101 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	PCNA	P12004	261 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	PTX3	P26022	381 aa	Predicted RBP	10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	SLC5A2	P31639	672 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	HNRNPH1	P31943	449 aa	Known RBP	10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	ETV5	P41161	510 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	IDH3A	P50213	366 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	ARFIP1	P53367	373 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	EMP3	P54852	163 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	TBL3	Q12788	808 aa	Known RBP	10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	PDCD2	Q16342	344 aa	Predicted RBP	10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	DEFB110	Q30KQ9	67 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	SLC9B1	Q4ZJI4	515 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	SGO1	Q5FBB7	561 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	WASHC2D	Q5SRD0	308 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	VWA5B1	Q5TIE3	1220 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	TMEM214	Q6NUQ4	689 aa	Known RBP	10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	TLDC1	Q6P9B6	456 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	ASPG	Q86U10	573 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	AFAP1L2	Q8N4X5	818 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	TTC29	Q8NA56	475 aa	Predicted RBP	10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	CHTF18	Q8WVB6	975 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	SLC13A3	Q8WWT9	602 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	MS4A6E	Q96DS6	147 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	CMTM7	Q96FZ5	175 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	METTL2A	Q96IZ6	378 aa	Known RBP	10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	FCRL1	Q96LA6	429 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	CCT8L2	Q96SF2	557 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	CTRC	Q99895	268 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	TRIM55	Q9BYV6	548 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	KLHL31	Q9H511	634 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	APMAP	Q9HDC9	416 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	KLHL14	Q9P2G3	628 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	ACSL6	Q9UKU0	697 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	SRPK3	Q9UPE1	567 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	B3GALT1	Q9Y5Z6	326 aa		10.28	□□□□□ -0.76
EIF4A1-223	ENST00000582169	PMS2P1	A4D2B8	440 aa		10.27	□□□□□ -0.77
EIF4A1-223	ENST00000582169	TRPC5OS	A6NMA1	111 aa		10.27	□□□□□ -0.77
EIF4A1-223	ENST00000582169	C9orf172	C9J069	976 aa		10.27	□□□□□ -0.77
EIF4A1-223	ENST00000582169	SKAP2	O75563	359 aa	Predicted RBP	10.27	□□□□□ -0.77
EIF4A1-223	ENST00000582169	RSL1D1	O76021	490 aa	Known RBP	10.27	□□□□□ -0.77
EIF4A1-223	ENST00000582169	STK17B	O94768	372 aa		10.27	□□□□□ -0.77
EIF4A1-223	ENST00000582169	KLHL18	O94889	574 aa		10.27	□□□□□ -0.77
EIF4A1-223	ENST00000582169	SCEL	O95171	688 aa		10.27	□□□□□ -0.77
EIF4A1-223	ENST00000582169	MED26	O95402	600 aa		10.27	□□□□□ -0.77
EIF4A1-223	ENST00000582169	FAM107A	O95990	144 aa		10.27	□□□□□ -0.77
EIF4A1-223	ENST00000582169	SLC35G6	P0C7Q6	338 aa		10.27	□□□□□ -0.77
EIF4A1-223	ENST00000582169	LIPC	P11150	499 aa		10.27	□□□□□ -0.77

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