RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 NMRK1Q9NWW6 199 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 SIRT5Q9NXA8 310 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 SLC39A1Q9NY26 324 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 VTI1BQ9UEU0 232 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 ZDHHC2Q9UIJ5 367 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 SATB2Q9UPW6 733 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 RUVBL1Q9Y265 456 aaKnown RBP9.91□□□□□ -0.82
CCDC47-203ENST00000580986 TMEM184BQ9Y519 407 aaPredicted RBP9.91□□□□□ -0.82
CCDC47-203ENST00000580986 DNAJC15Q9Y5T4 150 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 WDFY3Q8IZQ1 3526 aa9.91□□□□□ -0.82
CCDC47-203ENST00000580986 KNTC1P50748 2209 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 A0A088AWK7 358 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 MAGEB17A8MXT2 336 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 CDRT15L2A8MXV6 281 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 P2RX6O15547 441 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 CPNE3O75131 537 aaKnown RBP9.9□□□□□ -0.82
CCDC47-203ENST00000580986 CRCPO75575 148 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 RSL1D1O76021 490 aaKnown RBP9.9□□□□□ -0.82
CCDC47-203ENST00000580986 SCELO95171 688 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 TGDSO95455 350 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 ACPPP15309 386 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 ALOX15P16050 662 aaPredicted RBP9.9□□□□□ -0.82
CCDC47-203ENST00000580986 PCSK2P16519 638 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 ZNF10P21506 573 aaPredicted RBP9.9□□□□□ -0.82
CCDC47-203ENST00000580986 CCR10P46092 362 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 FOXA1P55317 472 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 SHC2P98077 582 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 FOXM1Q08050 763 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 TGM3Q08188 693 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 SMU1Q2TAY7 513 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 XKR7Q5GH72 579 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 DEPDC1Q5TB30 811 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 KHDRBS2Q5VWX1 349 aaKnown RBP9.9□□□□□ -0.82
CCDC47-203ENST00000580986 TTC19Q6DKK2 380 aaPredicted RBP9.9□□□□□ -0.82
CCDC47-203ENST00000580986 PRMT9Q6P2P2 845 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 ZNF517Q6ZMY9 492 aaPredicted RBP9.9□□□□□ -0.82
CCDC47-203ENST00000580986 MED25Q71SY5 747 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 DGLUCYQ7Z3D6 616 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 MTERF4Q7Z6M4 381 aaKnown RBP9.9□□□□□ -0.82
CCDC47-203ENST00000580986 CRLF3Q8IUI8 442 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 TWIST2Q8WVJ9 160 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 NXPE2Q96DL1 559 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 MS4A6EQ96DS6 147 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 C11orf24Q96F05 449 aaPredicted RBP9.9□□□□□ -0.82
CCDC47-203ENST00000580986 SLC46A1Q96NT5 459 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 KCNC2Q96PR1 638 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 SIKE1Q9BRV8 207 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 NDC1Q9BTX1 674 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 SPRY4Q9C004 299 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 ROGDIQ9GZN7 287 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 REXO4Q9GZR2 422 aaKnown RBP9.9□□□□□ -0.82
CCDC47-203ENST00000580986 ADAM29Q9UKF5 820 aa9.9□□□□□ -0.82
CCDC47-203ENST00000580986 CACNA1AO00555 2505 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 A0A1B0GX78 115 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 HYKKA2RU49 373 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 SRRM3A6NNA2 597 aaPredicted RBP9.89□□□□□ -0.83
CCDC47-203ENST00000580986 H0YIG0 161 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 SLC28A1O00337 649 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 FFAR3O14843 346 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 DSCR3O14972 297 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 HDAC3O15379 428 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 GPR42O15529 346 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 ZNF749O43361 778 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 HYAL3O43820 417 aaPredicted RBP9.89□□□□□ -0.83
CCDC47-203ENST00000580986 EDF1O60869 148 aaKnown RBP9.89□□□□□ -0.83
CCDC47-203ENST00000580986 LYPLA1O75608 230 aaPredicted RBP9.89□□□□□ -0.83
CCDC47-203ENST00000580986 SCRG1O75711 98 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 NSA2O95478 260 aaKnown RBP9.89□□□□□ -0.83
CCDC47-203ENST00000580986 PDYNP01213 254 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 ADRB1P08588 477 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 PCNAP12004 261 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 ALOX12P18054 663 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 ITIH1P19827 911 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 HNRNPH1P31943 449 aaKnown RBP9.89□□□□□ -0.83
CCDC47-203ENST00000580986 RORAP35398 523 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 ETV5P41161 510 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 GSTM5P46439 218 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 CLDN6P56747 220 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 GABREP78334 506 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 GUCY1A3Q02108 690 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 ABRAXAS2Q15018 415 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 HKDC1Q2TB90 917 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 SPIN4Q56A73 249 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 C3orf38Q5JPI3 329 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 CLEC6AQ6EIG7 209 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 PWWP2BQ6NUJ5 590 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 GALNT18Q6P9A2 607 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 TRIM40Q6P9F5 258 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 ERMP1Q7Z2K6 904 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 TMEM126BQ8IUX1 230 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 WDR75Q8IWA0 830 aaKnown RBP9.89□□□□□ -0.83
CCDC47-203ENST00000580986 C10orf90Q96M02 699 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 KCNA7Q96RP8 456 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 MTERF1Q99551 399 aaKnown RBP9.89□□□□□ -0.83
CCDC47-203ENST00000580986 C17orf62Q9BQA9 187 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 TBCDQ9BTW9 1192 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 ACPTQ9BZG2 426 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 ACTR5Q9H9F9 607 aaPredicted RBP9.89□□□□□ -0.83
CCDC47-203ENST00000580986 APMAPQ9HDC9 416 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 ASCL3Q9NQ33 180 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms