RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 HKDC1Q2TB90 917 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 MANEAQ5SRI9 462 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 PRAMEF17Q5VTA0 474 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 GARNL3Q5VVW2 1013 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 METTL21CQ5VZV1 264 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 C6orf15Q6UXA7 325 aaPredicted RBP14.78□□□□□ -0.04
SS18-216ENST00000580751 ATG14Q6ZNE5 492 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 DTX1Q86Y01 620 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 CACNA2D3Q8IZS8 1091 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 NLGN4XQ8N0W4 816 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 ANKRD53Q8N9V6 530 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 GALNT6Q8NCL4 622 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 CCDC197Q8NCU1 140 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 TRPV3Q8NET8 790 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 NLGN4YQ8NFZ3 816 aaPredicted RBP14.78□□□□□ -0.04
SS18-216ENST00000580751 OR52B6Q8NGF0 335 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 SLC13A3Q8WWT9 602 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 ZCCHC14Q8WYQ9 949 aaKnown RBP14.78□□□□□ -0.04
SS18-216ENST00000580751 REPS1Q96D71 796 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 TM4SF19Q96DZ7 209 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 DPH2Q9BQC3 489 aaPredicted RBP14.78□□□□□ -0.04
SS18-216ENST00000580751 SYNPO2LQ9H987 977 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 NPHS2Q9NP85 383 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 STARD5Q9NSY2 213 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 CUTCQ9NTM9 273 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 PNPOQ9NVS9 261 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.78□□□□□ -0.04
SS18-216ENST00000580751 RUVBL1Q9Y265 456 aaKnown RBP14.78□□□□□ -0.04
SS18-216ENST00000580751 TSC22D4Q9Y3Q8 395 aa14.78□□□□□ -0.04
SS18-216ENST00000580751 A0A1B0GX78 115 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 SERTM1A2A2V5 107 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 ZNF195O14628 629 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 P2RX6O15547 441 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 NDUFS4O43181 175 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 KRT6AP02538 564 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 KRT6BP04259 564 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 CAPNS1P04632 268 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 CCNYL3P0C7X3 344 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 PCSK2P16519 638 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 RORAP35398 523 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 KRT6CP48668 564 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 ARFIP2P53365 341 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 RGS1Q08116 209 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 NDUFA9Q16795 377 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 UGT3A2Q3SY77 523 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 MED27Q6P2C8 311 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 EPGNQ6UW88 154 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 SYVN1Q86TM6 617 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.77□□□□□ -0.05
SS18-216ENST00000580751 OR4F6Q8NGB9 312 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 KCNE4Q8WWG9 221 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 MOCOSQ96EN8 888 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 CCDC28BQ9BUN5 200 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 ADGRE2Q9UHX3 823 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 SNX6Q9UNH7 406 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 PCDHGA11Q9Y5H2 935 aa14.77□□□□□ -0.05
SS18-216ENST00000580751 SEC16AO15027 2179 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 URADA6NGE7 173 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 ANKDD1BA6NHY2 528 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 H0YIV9 168 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 MEN1O00255 615 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 DSCR3O14972 297 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 TLX3O43711 291 aaPredicted RBP14.76□□□□□ -0.05
SS18-216ENST00000580751 CLEC3AO75596 197 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 SERPIND1P05546 499 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 CCR10P46092 362 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 AQP5P55064 265 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 CYP4F2P78329 520 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 PHEXP78562 749 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 ABHD18Q0P651 414 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 LETMD1Q6P1Q0 360 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 TTLL10Q6ZVT0 673 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 RPS27LQ71UM5 84 aaKnown RBP14.76□□□□□ -0.05
SS18-216ENST00000580751 TIPARPQ7Z3E1 657 aaKnown RBP14.76□□□□□ -0.05
SS18-216ENST00000580751 LAS2Q8IYD9 372 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 DSELQ8IZU8 1212 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 SLC38A9Q8NBW4 561 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 METTL6Q8TCB7 284 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 NT5CQ8TCD5 201 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 ACTRT2Q8TDY3 377 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 C10orf82Q8WW14 230 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 MVB12AQ96EY5 273 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 MAELQ96JY0 434 aaKnown RBP14.76□□□□□ -0.05
SS18-216ENST00000580751 C10orf90Q96M02 699 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 GBP5Q96PP8 586 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 C17orf62Q9BQA9 187 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 DPH1Q9BZG8 443 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 RHBGQ9H310 441 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 MEAF6Q9HAF1 191 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 KCNK13Q9HB14 408 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 DHCR7Q9UBM7 475 aaKnown RBP14.76□□□□□ -0.05
SS18-216ENST00000580751 NDOR1Q9UHB4 597 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 ZNF225Q9UK10 706 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 PADI1Q9ULC6 663 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 ZNF490Q9ULM2 529 aaPredicted RBP14.76□□□□□ -0.05
SS18-216ENST00000580751 DNAJC15Q9Y5T4 150 aa14.76□□□□□ -0.05
SS18-216ENST00000580751 A0A0G2JND7 137 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 TEX51A0A1B0GUA7 166 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 PPP6CO00743 305 aa14.75□□□□□ -0.05
SS18-216ENST00000580751 RRP8O43159 456 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms