RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 CHST10O43529 356 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 B4GALT2O60909 372 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 TSPAN12O95859 305 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 ZNF888P0CJ79 500 aaPredicted RBP12.9□□□□□ -0.34
GGA3-208ENST00000579743 GNAZP19086 355 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 SCTRP47872 440 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 SMSP52788 366 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 CDKL1Q00532 357 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 RHAGQ02094 409 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 ALDH6A1Q02252 535 aaKnown RBP12.9□□□□□ -0.34
GGA3-208ENST00000579743 ART3Q13508 389 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 TUBA3CQ13748 450 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 USP10Q14694 798 aaKnown RBP12.9□□□□□ -0.34
GGA3-208ENST00000579743 OR1C1Q15619 314 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 CATSPEREQ5SY80 951 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 SP5Q6BEB4 398 aaPredicted RBP12.9□□□□□ -0.34
GGA3-208ENST00000579743 TUBA3EQ6PEY2 450 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 TMPRSS11BQ86T26 416 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 ADAMTSL2Q86TH1 951 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 RPS19BP1Q86WX3 136 aaKnown RBP12.9□□□□□ -0.34
GGA3-208ENST00000579743 PDSS2Q86YH6 399 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 CRLF3Q8IUI8 442 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 KRT78Q8N1N4 520 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 AFAP1L2Q8N4X5 818 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 CDKL2Q92772 493 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 TMEM125Q96AQ2 219 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 CAPZA3Q96KX2 299 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 TSNARE1Q96NA8 513 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 RBCK1Q9BYM8 510 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 CNOT10Q9H9A5 744 aaKnown RBP12.9□□□□□ -0.34
GGA3-208ENST00000579743 CHST11Q9NPF2 352 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 RNF14Q9UBS8 474 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 CTNNAL1Q9UBT7 734 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 SAR1BQ9Y6B6 198 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 TEX264Q9Y6I9 313 aa12.9□□□□□ -0.34
GGA3-208ENST00000579743 FAM95CA0A1B0GW59 222 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 GABRR3A8MPY1 467 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 EFCAB8A8MWE9 144 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 FAM227AF5H4B4 570 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 CLDN4O14493 209 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 SERPINA6P08185 405 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 ZNF37AP17032 561 aaPredicted RBP12.89□□□□□ -0.35
GGA3-208ENST00000579743 GSTM2P28161 218 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 CD96P40200 585 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 CA7P43166 264 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 ITGA8P53708 1063 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 SLC26A5P58743 744 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 GNG11P61952 73 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 SRSF11Q05519 484 aaKnown RBP12.89□□□□□ -0.35
GGA3-208ENST00000579743 PDIA2Q13087 525 aaKnown RBP12.89□□□□□ -0.35
GGA3-208ENST00000579743 RCN2Q14257 317 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 STEAP4Q687X5 459 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 FCRLBQ6BAA4 426 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 XKRXQ6PP77 449 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 NXPE4Q6UWF7 544 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 QSOX2Q6ZRP7 698 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 ANKMY2Q8IV38 441 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 IGDCC3Q8IVU1 814 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 ZNF808Q8N4W9 903 aaPredicted RBP12.89□□□□□ -0.35
GGA3-208ENST00000579743 MARVELD3Q96A59 401 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 TSPAN17Q96FV3 270 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 OR4K3Q96R72 315 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 NAPGQ99747 312 aaPredicted RBP12.89□□□□□ -0.35
GGA3-208ENST00000579743 CDCP1Q9H5V8 836 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 POPDC3Q9HBV1 291 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 GPAMQ9HCL2 828 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 PRM3Q9NNZ6 103 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 PRDM9Q9NQV7 894 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 KLHL1Q9NR64 748 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 LANCL2Q9NS86 450 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 SLC22A14Q9Y267 594 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 MRPS33Q9Y291 106 aaKnown RBP12.89□□□□□ -0.35
GGA3-208ENST00000579743 KLF2Q9Y5W3 355 aaPredicted RBP12.89□□□□□ -0.35
GGA3-208ENST00000579743 SCN2AQ99250 2005 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 SCN3AQ9NY46 2000 aa12.89□□□□□ -0.35
GGA3-208ENST00000579743 ARHGAP10A1A4S6 786 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 OR2W5A6NFC9 320 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 SLC19A2O60779 497 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 SEC31AO94979 1220 aaKnown RBP12.88□□□□□ -0.35
GGA3-208ENST00000579743 IVDP26440 423 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 HNF4AP41235 474 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 CYB561P49447 251 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 REEP5Q00765 189 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 TGM3Q08188 693 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 CALCOCO2Q13137 446 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 MAPKAPK3Q16644 382 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 SLC25A25Q6KCM7 469 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 TRMT10BQ6PF06 316 aaKnown RBP12.88□□□□□ -0.35
GGA3-208ENST00000579743 SBSNQ6UWP8 590 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 MRGPRGQ86SM5 289 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 ZC3HC1Q86WB0 502 aaKnown RBP12.88□□□□□ -0.35
GGA3-208ENST00000579743 TCAIMQ8N3R3 496 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 FBXO36Q8NEA4 188 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 OR5T3Q8NGG3 340 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 ADAMTS18Q8TE60 1221 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 UTP15Q8TED0 518 aaKnown RBP12.88□□□□□ -0.35
GGA3-208ENST00000579743 THAP3Q8WTV1 239 aaPredicted RBP12.88□□□□□ -0.35
GGA3-208ENST00000579743 CCT6BQ92526 530 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 SEC16BQ96JE7 1060 aa12.88□□□□□ -0.35
GGA3-208ENST00000579743 OLFM1Q99784 485 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms