RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 WDR34Q96EX3 536 aa14.02□□□□□ -0.17
SS18-212ENST00000579061 SMIM10Q96HG1 83 aa14.02□□□□□ -0.17
SS18-212ENST00000579061 LMF1Q96S06 567 aa14.02□□□□□ -0.17
SS18-212ENST00000579061 MESP1Q9BRJ9 268 aa14.02□□□□□ -0.17
SS18-212ENST00000579061 TUBB6Q9BUF5 446 aa14.02□□□□□ -0.17
SS18-212ENST00000579061 ALG9Q9H6U8 611 aa14.02□□□□□ -0.17
SS18-212ENST00000579061 ZNF160Q9HCG1 818 aa14.02□□□□□ -0.17
SS18-212ENST00000579061 SLAMF7Q9NQ25 335 aa14.02□□□□□ -0.17
SS18-212ENST00000579061 SNX15Q9NRS6 342 aa14.02□□□□□ -0.17
SS18-212ENST00000579061 HCN3Q9P1Z3 774 aa14.02□□□□□ -0.17
SS18-212ENST00000579061 C19orf25Q9UFG5 118 aaPredicted RBP14.02□□□□□ -0.17
SS18-212ENST00000579061 B3GNT3Q9Y2A9 372 aa14.02□□□□□ -0.17
SS18-212ENST00000579061 SYCE1LA8MT33 242 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 JRKO75564 520 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 ACSL3O95573 720 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 SERPINA7P05543 415 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 INHBAP08476 426 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 PRR35P0CG20 571 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 ZNF888P0CJ79 500 aaPredicted RBP14.01□□□□□ -0.17
SS18-212ENST00000579061 HPDP32754 393 aaPredicted RBP14.01□□□□□ -0.17
SS18-212ENST00000579061 SERPINB8P50452 374 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 SERPINB9P50453 376 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 EFNA3P52797 238 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 STXBP1P61764 594 aaKnown RBP14.01□□□□□ -0.17
SS18-212ENST00000579061 LAPTM5Q13571 262 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 E2F2Q14209 437 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 SLBPQ14493 270 aaKnown RBP eCLIP14.01□□□□□ -0.17
SS18-212ENST00000579061 PCOLCEQ15113 449 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 TBCCQ15814 346 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 IGFBP7Q16270 282 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 PDK4Q16654 411 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 DEFB134Q4QY38 66 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 ATCAYQ86WG3 371 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 CENPLQ8N0S6 344 aaPredicted RBP14.01□□□□□ -0.17
SS18-212ENST00000579061 EFCAB3Q8N7B9 438 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 CPT1CQ8TCG5 803 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 PPP4R1Q8TF05 950 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 UBTD2Q8WUN7 234 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 SLC44A1Q8WWI5 657 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 PTCD3Q96EY7 689 aaKnown RBP14.01□□□□□ -0.17
SS18-212ENST00000579061 IMMP1LQ96LU5 166 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 EFCAB11Q9BUY7 163 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 MFRPQ9BY79 579 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 CD244Q9BZW8 370 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 EPS8L2Q9H6S3 715 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 CPAMD8Q8IZJ3 1885 aa14.01□□□□□ -0.17
SS18-212ENST00000579061 ZNF860A6NHJ4 632 aa14□□□□□ -0.17
SS18-212ENST00000579061 ANKDD1BA6NHY2 528 aa14□□□□□ -0.17
SS18-212ENST00000579061 SUPT3HB4E1H0 165 aa14□□□□□ -0.17
SS18-212ENST00000579061 CHST10O43529 356 aa14□□□□□ -0.17
SS18-212ENST00000579061 SUPT3HO75486 399 aa14□□□□□ -0.17
SS18-212ENST00000579061 CLEC3AO75596 197 aa14□□□□□ -0.17
SS18-212ENST00000579061 KLHL2O95198 593 aa14□□□□□ -0.17
SS18-212ENST00000579061 ALDOAP04075 364 aaKnown RBP14□□□□□ -0.17
SS18-212ENST00000579061 FHP07954 510 aa14□□□□□ -0.17
SS18-212ENST00000579061 JAK1P23458 1154 aa14□□□□□ -0.17
SS18-212ENST00000579061 TYK2P29597 1187 aa14□□□□□ -0.17
SS18-212ENST00000579061 GMPRP36959 345 aa14□□□□□ -0.17
SS18-212ENST00000579061 CASP2P42575 452 aa14□□□□□ -0.17
SS18-212ENST00000579061 PCDH1Q08174 1060 aa14□□□□□ -0.17
SS18-212ENST00000579061 MFAP5Q13361 173 aa14□□□□□ -0.17
SS18-212ENST00000579061 BMPR2Q13873 1038 aa14□□□□□ -0.17
SS18-212ENST00000579061 ACAP2Q15057 778 aa14□□□□□ -0.17
SS18-212ENST00000579061 UAP1Q16222 522 aaPredicted RBP14□□□□□ -0.17
SS18-212ENST00000579061 PLEKHN1Q494U1 663 aaPredicted RBP14□□□□□ -0.17
SS18-212ENST00000579061 MINDY4Q4G0A6 757 aa14□□□□□ -0.17
SS18-212ENST00000579061 CRB2Q5IJ48 1285 aa14□□□□□ -0.17
SS18-212ENST00000579061 MFSD4BQ5TF39 518 aa14□□□□□ -0.17
SS18-212ENST00000579061 KLC3Q6P597 504 aa14□□□□□ -0.17
SS18-212ENST00000579061 ISLR2Q6UXK2 745 aa14□□□□□ -0.17
SS18-212ENST00000579061 TAOK1Q7L7X3 1001 aa14□□□□□ -0.17
SS18-212ENST00000579061 CPEB2Q7Z5Q1 589 aaKnown RBP14□□□□□ -0.17
SS18-212ENST00000579061 IFT20Q8IY31 132 aa14□□□□□ -0.17
SS18-212ENST00000579061 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14□□□□□ -0.17
SS18-212ENST00000579061 SNX31Q8N9S9 440 aa14□□□□□ -0.17
SS18-212ENST00000579061 KCTD4Q8WVF5 259 aa14□□□□□ -0.17
SS18-212ENST00000579061 GAL3ST3Q96A11 431 aa14□□□□□ -0.17
SS18-212ENST00000579061 ISL2Q96A47 359 aa14□□□□□ -0.17
SS18-212ENST00000579061 ESAMQ96AP7 390 aa14□□□□□ -0.17
SS18-212ENST00000579061 TBC1D20Q96BZ9 403 aa14□□□□□ -0.17
SS18-212ENST00000579061 MRRFQ96E11 262 aaKnown RBP14□□□□□ -0.17
SS18-212ENST00000579061 PEX11GQ96HA9 241 aa14□□□□□ -0.17
SS18-212ENST00000579061 WDR77Q9BQA1 342 aaPredicted RBP14□□□□□ -0.17
SS18-212ENST00000579061 ZBTB20Q9HC78 741 aaPredicted RBP14□□□□□ -0.17
SS18-212ENST00000579061 LANCL2Q9NS86 450 aa14□□□□□ -0.17
SS18-212ENST00000579061 ZNF180Q9UJW8 692 aa14□□□□□ -0.17
SS18-212ENST00000579061 PLAAQ9Y263 795 aa14□□□□□ -0.17
SS18-212ENST00000579061 IKBKGQ9Y6K9 419 aa14□□□□□ -0.17
SS18-212ENST00000579061 SPENQ96T58 3664 aaKnown RBP14□□□□□ -0.17
SS18-212ENST00000579061 A0A087WUV0 522 aaPredicted RBP13.99□□□□□ -0.17
SS18-212ENST00000579061 A0A096LPK6 155 aa13.99□□□□□ -0.17
SS18-212ENST00000579061 MAGEB17A8MXT2 336 aa13.99□□□□□ -0.17
SS18-212ENST00000579061 K7EPI3 171 aa13.99□□□□□ -0.17
SS18-212ENST00000579061 UBXN8O00124 270 aa13.99□□□□□ -0.17
SS18-212ENST00000579061 CCNT2O60583 730 aaKnown RBP13.99□□□□□ -0.17
SS18-212ENST00000579061 PRAMEF4O60810 478 aa13.99□□□□□ -0.17
SS18-212ENST00000579061 KRT38O76015 456 aa13.99□□□□□ -0.17
SS18-212ENST00000579061 MTHFD2P13995 350 aa13.99□□□□□ -0.17
SS18-212ENST00000579061 CNTFP26441 200 aa13.99□□□□□ -0.17
SS18-212ENST00000579061 SOX11P35716 441 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms