RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 DEPDC7Q96QD5 511 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 OR2A5Q96R48 311 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 PLCD4Q9BRC7 762 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 DPH7Q9BTV6 452 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 CD244Q9BZW8 370 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 B3GNT4Q9C0J1 378 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 KLHL25Q9H0H3 589 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 ATG10Q9H0Y0 220 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 VPS11Q9H270 941 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 MRPL46Q9H2W6 279 aaKnown RBP3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 GSTO2Q9H4Y5 243 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 STN1Q9H668 368 aaKnown RBP3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 VIPAS39Q9H9C1 493 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 NMRAL1Q9HBL8 299 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 TMBIM4Q9HC24 238 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 TNFRSF12AQ9NP84 129 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 CCDC177Q9NQR7 707 aaPredicted RBP3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 FBXO8Q9NRD0 319 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC22A11Q9NSA0 550 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 ARL15Q9NXU5 204 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 NUDT4Q9NZJ9 180 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 FOXJ2Q9P0K8 574 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 TXNDC16Q9P2K2 825 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 ANKMY1Q9P2S6 941 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC17A7Q9P2U7 560 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 TAC3Q9UHF0 121 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 PCTPQ9UKL6 214 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 ZNF490Q9ULM2 529 aaPredicted RBP3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 SATB2Q9UPW6 733 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 MRPS2Q9Y399 296 aaKnown RBP3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 TMEM184BQ9Y519 407 aaPredicted RBP3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 PCDHGA7Q9Y5G6 932 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 IGSF10Q6WRI0 2623 aa3.62□□□□□ -1.83
SMARCE1-215ENST00000578995 PCNX3Q9H6A9 2034 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 LOC105369274A0A096LPK9 316 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 LOC102723532A0A0G2JNH3 316 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 GSAPA4D1B5 854 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 TRABD2BA6NFA1 517 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 NCF1BA6NI72 391 aaPredicted RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 A8MU76 341 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 NCF1CA8MVU1 366 aaPredicted RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 K7EPI3 171 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 HAT1O14929 419 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 PLD2O14939 933 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 PRPF4O43172 522 aaKnown RBP eCLIP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 BRINP1O60477 761 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 CNOT3O75175 753 aaKnown RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 SPAG7O75391 227 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 IPO13O94829 963 aaKnown RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 KLHL18O94889 574 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 ANXA5P08758 320 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 SMIM10L1P0DMW3 83 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 CDH1P12830 882 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 NCF1P14598 390 aaPredicted RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 AMD1P17707 334 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 WT1P19544 449 aaPredicted RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 CCND1P24385 295 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 TPP2P29144 1249 aaPredicted RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 RPA3P35244 121 aaPredicted RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 HSD17B2P37059 387 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 BCL6P41182 706 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 CCR10P46092 362 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 HSPA7P48741 367 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 SEPHS1P49903 392 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC18A1P54219 525 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 PRKAA2P54646 552 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 ALDH18A1P54886 795 aaKnown RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC12A2P55011 1212 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 HSD11B2P80365 405 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 ABATP80404 500 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 EGR3Q06889 387 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 CDC16Q13042 620 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 EIF3IQ13347 325 aaKnown RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 ELOAQ14241 798 aaKnown RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 GPR19Q15760 415 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 TBCCQ15814 346 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 FAM83EQ2M2I3 478 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 DEFB110Q30KQ9 67 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 ADPRMQ3LIE5 342 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 KRT71Q3SY84 523 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 CCDC157Q569K6 752 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 C3orf38Q5JPI3 329 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 ZNF678Q5SXM1 525 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 CEP85LQ5SZL2 805 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 PHF19Q5T6S3 580 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 PRAMEF17Q5VTA0 474 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 CACHD1Q5VU97 1274 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 ATG9BQ674R7 924 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 SULT1C3Q6IMI6 304 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 LCN10Q6JVE6 187 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 PWWP2BQ6NUJ5 590 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 IRGCQ6NXR0 463 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 METTL2BQ6P1Q9 378 aaKnown RBP3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 KLHL35Q6PF15 583 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 FIGLAQ6QHK4 219 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 ZYG11AQ6WRX3 759 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 RAPH1Q70E73 1250 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 COX15Q7KZN9 410 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 TAOK1Q7L7X3 1001 aa3.61□□□□□ -1.83
SMARCE1-215ENST00000578995 RAB11FIP2Q7L804 512 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms