RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 ATG10Q9H0Y0 220 aa9.76□□□□□ -0.85
SS18-210ENST00000578700 TRIT1Q9H3H1 467 aaKnown RBP9.76□□□□□ -0.85
SS18-210ENST00000578700 OSGEPL1Q9H4B0 414 aa9.76□□□□□ -0.85
SS18-210ENST00000578700 EFCAB1Q9HAE3 211 aa9.76□□□□□ -0.85
SS18-210ENST00000578700 APMAPQ9HDC9 416 aa9.76□□□□□ -0.85
SS18-210ENST00000578700 TNFRSF12AQ9NP84 129 aa9.76□□□□□ -0.85
SS18-210ENST00000578700 KLC4Q9NSK0 619 aa9.76□□□□□ -0.85
SS18-210ENST00000578700 TRNAU1APQ9NX07 287 aaKnown RBP9.76□□□□□ -0.85
SS18-210ENST00000578700 STOX2Q9P2F5 926 aaPredicted RBP9.76□□□□□ -0.85
SS18-210ENST00000578700 PLEKHB1Q9UF11 243 aaPredicted RBP9.76□□□□□ -0.85
SS18-210ENST00000578700 VPS4AQ9UN37 437 aa9.76□□□□□ -0.85
SS18-210ENST00000578700 SLC17A4Q9Y2C5 497 aa9.76□□□□□ -0.85
SS18-210ENST00000578700 PRKAB1Q9Y478 270 aa9.76□□□□□ -0.85
SS18-210ENST00000578700 ASB1Q9Y576 335 aa9.76□□□□□ -0.85
SS18-210ENST00000578700 ST14Q9Y5Y6 855 aa9.76□□□□□ -0.85
SS18-210ENST00000578700 KCNE2Q9Y6J6 123 aa9.76□□□□□ -0.85
SS18-210ENST00000578700 CACNA1DQ01668 2161 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 MANBAO00462 879 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 GSC2O15499 205 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 PEX11AO75192 247 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 STK17BO94768 372 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 ACP5P13686 325 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 GNAZP19086 355 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 GNLYP22749 145 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 MAPK1P28482 360 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 PRDX3P30048 256 aaKnown RBP9.75□□□□□ -0.85
SS18-210ENST00000578700 HNF4AP41235 474 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 UQCRFS1P47985 274 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 ERVK-8P63133 956 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 MC2RQ01718 297 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 MC1RQ01726 317 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 DMPKQ09013 629 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 ABHD18Q0P651 414 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 NAE1Q13564 534 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 TSTA3Q13630 321 aaPredicted RBP9.75□□□□□ -0.85
SS18-210ENST00000578700 ERV3-1Q14264 604 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 HIST2H2ACQ16777 129 aaPredicted RBP9.75□□□□□ -0.85
SS18-210ENST00000578700 SMU1Q2TAY7 513 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 GGTA1PQ4G0N0 100 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 AGKQ53H12 422 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 XKR7Q5GH72 579 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 XKR6Q5GH73 641 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 PAGE2BQ5JRK9 111 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 C10orf62Q5T681 223 aaPredicted RBP9.75□□□□□ -0.85
SS18-210ENST00000578700 FHL5Q5TD97 284 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 THEMIS2Q5TEJ8 643 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 CACHD1Q5VU97 1274 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 LIPJQ5W064 366 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 METRNLQ641Q3 311 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 HIST2H2AA3Q6FI13 130 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 OGFOD2Q6N063 350 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 LETMD1Q6P1Q0 360 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 RNF165Q6ZSG1 346 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 C11orf96Q7Z7L8 435 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 SNX32Q86XE0 403 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 RASGRP3Q8IV61 690 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 KLHDC8AQ8IYD2 350 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 POU5F2Q8N7G0 328 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 FNDC5Q8NAU1 212 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 OR10G6Q8NH81 332 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 TFGQ92734 400 aaPredicted RBP9.75□□□□□ -0.85
SS18-210ENST00000578700 PYCR2Q96C36 320 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 MARK4Q96L34 752 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 TEFMQ96QE5 360 aaKnown RBP9.75□□□□□ -0.85
SS18-210ENST00000578700 PKP4Q99569 1192 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 SERPINI1Q99574 410 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 ZBTB18Q99592 522 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 MIPEPQ99797 713 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 DPYSL5Q9BPU6 564 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 OR52A5Q9H2C5 316 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 RASSF4Q9H2L5 321 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 ZNF385DQ9H6B1 395 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 CCDC177Q9NQR7 707 aaPredicted RBP9.75□□□□□ -0.85
SS18-210ENST00000578700 TMEM45AQ9NWC5 275 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 TAS2R1Q9NYW7 299 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 GPRC5BQ9NZH0 403 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 ZNF490Q9ULM2 529 aaPredicted RBP9.75□□□□□ -0.85
SS18-210ENST00000578700 EIF3LQ9Y262 564 aaKnown RBP9.75□□□□□ -0.85
SS18-210ENST00000578700 SLC22A14Q9Y267 594 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 TDRKHQ9Y2W6 561 aaKnown RBP9.75□□□□□ -0.85
SS18-210ENST00000578700 PCDHB3Q9Y5E6 796 aa9.75□□□□□ -0.85
SS18-210ENST00000578700 A1L4Q6 167 aa9.74□□□□□ -0.85
SS18-210ENST00000578700 TTLL8A6PVC2 850 aa9.74□□□□□ -0.85
SS18-210ENST00000578700 BBIP1A8MTZ0 92 aa9.74□□□□□ -0.85
SS18-210ENST00000578700 PDZK1P1A8MUH7 402 aa9.74□□□□□ -0.85
SS18-210ENST00000578700 MKRN2OSH3BPM6 223 aa9.74□□□□□ -0.85
SS18-210ENST00000578700 FFAR3O14843 346 aa9.74□□□□□ -0.85
SS18-210ENST00000578700 AIM2O14862 343 aa9.74□□□□□ -0.85
SS18-210ENST00000578700 ANGPT2O15123 496 aa9.74□□□□□ -0.85
SS18-210ENST00000578700 GPR42O15529 346 aa9.74□□□□□ -0.85
SS18-210ENST00000578700 SLC16A8O95907 504 aa9.74□□□□□ -0.85
SS18-210ENST00000578700 SNRPB2P08579 225 aaKnown RBP9.74□□□□□ -0.85
SS18-210ENST00000578700 NUDT2P50583 147 aa9.74□□□□□ -0.85
SS18-210ENST00000578700 KCNK10P57789 538 aa9.74□□□□□ -0.85
SS18-210ENST00000578700 ELF3P78545 371 aaPredicted RBP9.74□□□□□ -0.85
SS18-210ENST00000578700 PHEXP78562 749 aa9.74□□□□□ -0.85
SS18-210ENST00000578700 GPLD1P80108 840 aa9.74□□□□□ -0.85
SS18-210ENST00000578700 EMX2Q04743 252 aa9.74□□□□□ -0.85
SS18-210ENST00000578700 FOXM1Q08050 763 aa9.74□□□□□ -0.85
SS18-210ENST00000578700 CHIT1Q13231 466 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms