RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 TRAF3Q13114 568 aa11.77□□□□□ -0.53
RARA-208ENST00000577646 CUL3Q13618 768 aa11.77□□□□□ -0.53
RARA-208ENST00000577646 DSG2Q14126 1118 aa11.77□□□□□ -0.53
RARA-208ENST00000577646 PCLAFQ15004 111 aa11.77□□□□□ -0.53
RARA-208ENST00000577646 HKDC1Q2TB90 917 aa11.77□□□□□ -0.53
RARA-208ENST00000577646 FRMD7Q6ZUT3 714 aa11.77□□□□□ -0.53
RARA-208ENST00000577646 GPRIN3Q6ZVF9 776 aa11.77□□□□□ -0.53
RARA-208ENST00000577646 MED25Q71SY5 747 aa11.77□□□□□ -0.53
RARA-208ENST00000577646 OVCH1Q7RTY7 1134 aa11.77□□□□□ -0.53
RARA-208ENST00000577646 CCNYL1Q8N7R7 359 aa11.77□□□□□ -0.53
RARA-208ENST00000577646 ZNF473Q8WTR7 871 aaKnown RBP11.77□□□□□ -0.53
RARA-208ENST00000577646 GAL3ST3Q96A11 431 aa11.77□□□□□ -0.53
RARA-208ENST00000577646 SMIM10Q96HG1 83 aa11.77□□□□□ -0.53
RARA-208ENST00000577646 SLC45A3Q96JT2 553 aa11.77□□□□□ -0.53
RARA-208ENST00000577646 ATP6V1G3Q96LB4 118 aa11.77□□□□□ -0.53
RARA-208ENST00000577646 IP6K3Q96PC2 410 aa11.77□□□□□ -0.53
RARA-208ENST00000577646 TMEM237Q96Q45 408 aa11.77□□□□□ -0.53
RARA-208ENST00000577646 NPLQ9BXD5 320 aaPredicted RBP11.77□□□□□ -0.53
RARA-208ENST00000577646 SPNS1Q9H2V7 528 aa11.77□□□□□ -0.53
RARA-208ENST00000577646 GPN2Q9H9Y4 310 aaPredicted RBP11.77□□□□□ -0.53
RARA-208ENST00000577646 EML4Q9HC35 981 aaKnown RBP11.77□□□□□ -0.53
RARA-208ENST00000577646 KCNK9Q9NPC2 374 aa11.77□□□□□ -0.53
RARA-208ENST00000577646 SEMA4BQ9NPR2 832 aaPredicted RBP11.77□□□□□ -0.53
RARA-208ENST00000577646 IFT80Q9P2H3 777 aaPredicted RBP11.77□□□□□ -0.53
RARA-208ENST00000577646 NDOR1Q9UHB4 597 aa11.77□□□□□ -0.53
RARA-208ENST00000577646 FARSAQ9Y285 508 aaKnown RBP11.77□□□□□ -0.53
RARA-208ENST00000577646 IGLV3-12A0A075B6K2 115 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 UQCRHLA0A096LP55 91 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 SERTM1A2A2V5 107 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 SYNDIG1LA6NDD5 238 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 LRRC14BA6NHZ5 514 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 TERTO14746 1132 aaKnown RBP11.76□□□□□ -0.53
RARA-208ENST00000577646 IGHEP01854 428 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 BPGMP07738 259 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 UQCRHP07919 91 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 DHRS4L1P0CG22 281 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 CD22P20273 847 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 ITPKBP27987 946 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 PTPN4P29074 926 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 ARL1P40616 181 aaPredicted RBP11.76□□□□□ -0.53
RARA-208ENST00000577646 MAGOHP61326 146 aaKnown RBP11.76□□□□□ -0.53
RARA-208ENST00000577646 RCN2Q14257 317 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 ZRSR2Q15696 482 aaKnown RBP11.76□□□□□ -0.53
RARA-208ENST00000577646 RBBP7Q16576 425 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 FRG2Q64ET8 278 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 MYLK4Q86YV6 388 aaPredicted RBP11.76□□□□□ -0.53
RARA-208ENST00000577646 C10orf107Q8IVU9 208 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 SPACA3Q8IXA5 215 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.76□□□□□ -0.53
RARA-208ENST00000577646 GBP7Q8N8V2 638 aaPredicted RBP11.76□□□□□ -0.53
RARA-208ENST00000577646 OR2L5Q8NG80 312 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 OR4F6Q8NGB9 312 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 OR52B6Q8NGF0 335 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 TRPC4APQ8TEL6 797 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 SNRNP27Q8WVK2 155 aaKnown RBP11.76□□□□□ -0.53
RARA-208ENST00000577646 NAF1Q96HR8 494 aaKnown RBP11.76□□□□□ -0.53
RARA-208ENST00000577646 VPS50Q96JG6 964 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 FAR2Q96K12 515 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 C10orf90Q96M02 699 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 FRG2BQ96QU4 278 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 SERPINI1Q99574 410 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 TBCDQ9BTW9 1192 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 TGIF2Q9GZN2 237 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 CHST8Q9H2A9 424 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 GSTO2Q9H4Y5 243 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 BRF2Q9HAW0 419 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 MKKSQ9NPJ1 570 aaPredicted RBP11.76□□□□□ -0.53
RARA-208ENST00000577646 STARD5Q9NSY2 213 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 NKIRAS1Q9NYS0 192 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 AHSPQ9NZD4 102 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 SLC17A7Q9P2U7 560 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 DHCR7Q9UBM7 475 aaKnown RBP11.76□□□□□ -0.53
RARA-208ENST00000577646 RNF11Q9Y3C5 154 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 MAP4K5Q9Y4K4 846 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 GCN1Q92616 2671 aaKnown RBP11.76□□□□□ -0.53
RARA-208ENST00000577646 AHCTF1Q8WYP5 2266 aa11.76□□□□□ -0.53
RARA-208ENST00000577646 SDK2Q58EX2 2172 aa11.75□□□□□ -0.53
RARA-208ENST00000577646 LOC101059948A0A1B0GTJ6 334 aa11.75□□□□□ -0.53
RARA-208ENST00000577646 P2RX6O15547 441 aa11.75□□□□□ -0.53
RARA-208ENST00000577646 FOXS1O43638 330 aa11.75□□□□□ -0.53
RARA-208ENST00000577646 GALR3O60755 368 aaPredicted RBP11.75□□□□□ -0.53
RARA-208ENST00000577646 SEMA3DO95025 777 aa11.75□□□□□ -0.53
RARA-208ENST00000577646 SERPIND1P05546 499 aa11.75□□□□□ -0.53
RARA-208ENST00000577646 CAPN1P07384 714 aa11.75□□□□□ -0.53
RARA-208ENST00000577646 CTSBP07858 339 aa11.75□□□□□ -0.53
RARA-208ENST00000577646 FGF4P08620 206 aa11.75□□□□□ -0.53
RARA-208ENST00000577646 CREB1P16220 341 aa11.75□□□□□ -0.53
RARA-208ENST00000577646 FBLP22087 321 aaKnown RBP11.75□□□□□ -0.53
RARA-208ENST00000577646 ALDH3A1P30838 453 aa11.75□□□□□ -0.53
RARA-208ENST00000577646 DLSTP36957 453 aa11.75□□□□□ -0.53
RARA-208ENST00000577646 SERPINB4P48594 390 aa11.75□□□□□ -0.53
RARA-208ENST00000577646 CDH13P55290 713 aa11.75□□□□□ -0.53
RARA-208ENST00000577646 TMPRSS3P57727 454 aa11.75□□□□□ -0.53
RARA-208ENST00000577646 OCA2Q04671 838 aa11.75□□□□□ -0.53
RARA-208ENST00000577646 TLE3Q04726 772 aa11.75□□□□□ -0.53
RARA-208ENST00000577646 HYAL2Q12891 473 aa11.75□□□□□ -0.53
RARA-208ENST00000577646 DNASE1L3Q13609 305 aa11.75□□□□□ -0.53
RARA-208ENST00000577646 NCF4Q15080 339 aa11.75□□□□□ -0.53
RARA-208ENST00000577646 CPSF6Q16630 551 aaKnown RBP eCLIP11.75□□□□□ -0.53
RARA-208ENST00000577646 DEPDC1Q5TB30 811 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms