RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 PTCD3Q96EY7 689 aaKnown RBP13.21□□□□□ -0.29
GGA3-203ENST00000577435 OR1F2PQ96R84 312 aa13.21□□□□□ -0.29
GGA3-203ENST00000577435 EFCAB11Q9BUY7 163 aa13.21□□□□□ -0.29
GGA3-203ENST00000577435 NAALAD2Q9Y3Q0 740 aa13.21□□□□□ -0.29
GGA3-203ENST00000577435 SUPT3HB4E1H0 165 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 POC1B-GALNT4F8VUJ3 575 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 K7EPI3 171 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 UBXN8O00124 270 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 RIPK2O43353 540 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 CCNT2O60583 730 aaKnown RBP13.2□□□□□ -0.3
GGA3-203ENST00000577435 DPM1O60762 260 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 ALOX12BO75342 701 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 SUPT3HO75486 399 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 CLEC3AO75596 197 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 WFS1O76024 890 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 SERPIND1P05546 499 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 FAM153BP0C7A2 387 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 XCR1P46094 333 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 ALDH18A1P54886 795 aaKnown RBP13.2□□□□□ -0.3
GGA3-203ENST00000577435 DOC2AQ14183 400 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 SLBPQ14493 270 aaKnown RBP eCLIP13.2□□□□□ -0.3
GGA3-203ENST00000577435 FAM153CQ494X1 144 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 FBXO48Q5FWF7 155 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 XKR6Q5GH73 641 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 LGSNQ5TDP6 509 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 ADGRD1Q6QNK2 874 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 IGFL3Q6UXB1 125 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 TIFABQ6ZNK6 161 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 PRICKLE2Q7Z3G6 844 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 SNX31Q8N9S9 440 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 UHMK1Q8TAS1 419 aaKnown RBP13.2□□□□□ -0.3
GGA3-203ENST00000577435 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.2□□□□□ -0.3
GGA3-203ENST00000577435 VN1R1Q9GZP7 353 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 AICDAQ9GZX7 198 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 VPS11Q9H270 941 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 RHBGQ9H310 441 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 FETUBQ9UGM5 382 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 MKL2Q9ULH7 1088 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 ZNF490Q9ULM2 529 aaPredicted RBP13.2□□□□□ -0.3
GGA3-203ENST00000577435 ASB1Q9Y576 335 aa13.2□□□□□ -0.3
GGA3-203ENST00000577435 IGHV1-45A0A0A0MS14 117 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 EXOC1LA0A1B0GW35 172 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 LRIT2A6NDA9 550 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 ANKDD1BA6NHY2 528 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 MASP2O00187 686 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 RDH16O75452 317 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 JRKO75564 520 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 ALPPP05187 535 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 SNRPAP09012 282 aaKnown RBP13.19□□□□□ -0.3
GGA3-203ENST00000577435 RBP1P09455 135 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 ZNF888P0CJ79 500 aaPredicted RBP13.19□□□□□ -0.3
GGA3-203ENST00000577435 COX6A1P12074 109 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 CD22P20273 847 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 GCAP28676 217 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 HPDP32754 393 aaPredicted RBP13.19□□□□□ -0.3
GGA3-203ENST00000577435 AGTR2P50052 363 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 EFNA3P52797 238 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 STXBP1P61764 594 aaKnown RBP13.19□□□□□ -0.3
GGA3-203ENST00000577435 IRF8Q02556 426 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 CHIT1Q13231 466 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 NAA30Q147X3 362 aaPredicted RBP13.19□□□□□ -0.3
GGA3-203ENST00000577435 SETDB1Q15047 1291 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 PCBP2Q15366 365 aaKnown RBP eCLIP13.19□□□□□ -0.3
GGA3-203ENST00000577435 TSNAXIP1Q2TAA8 658 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 ADPRMQ3LIE5 342 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 DEFB134Q4QY38 66 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 PAGE2BQ5JRK9 111 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.19□□□□□ -0.3
GGA3-203ENST00000577435 PLD6Q8N2A8 252 aaKnown RBP13.19□□□□□ -0.3
GGA3-203ENST00000577435 EXT2Q93063 718 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 C8orf44Q96CB5 159 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 MESP1Q9BRJ9 268 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 LHPPQ9H008 270 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 ZNF700Q9H0M5 742 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 KLHL31Q9H511 634 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 HCN3Q9P1Z3 774 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 OPTCQ9UBM4 332 aa13.19□□□□□ -0.3
GGA3-203ENST00000577435 TNPO3Q9Y5L0 923 aaKnown RBP13.19□□□□□ -0.3
GGA3-203ENST00000577435 NSG1A0A0A6YYJ2 146 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 TRIM49D1C9J1S8 452 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 CHST10O43529 356 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 DNAJB6O75190 326 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 TBX6O95947 436 aaPredicted RBP13.18□□□□□ -0.3
GGA3-203ENST00000577435 C8orf89P0DMQ9 161 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 ICAM2P13598 275 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 EPB42P16452 691 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 ITGA3P26006 1051 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 TNFRSF8P28908 595 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 GLRBP48167 497 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 TLE1Q04724 770 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 Q0VFX4 171 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 SLC29A2Q14542 456 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 HIST2H2ACQ16777 129 aaPredicted RBP13.18□□□□□ -0.3
GGA3-203ENST00000577435 PFKFB4Q16877 469 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 TECRLQ5HYJ1 363 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 TOR1AIP1Q5JTV8 583 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 HIST2H2AA3Q6FI13 130 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 IGFL2Q6UWQ7 119 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 RIPOR1Q6ZS17 1223 aa13.18□□□□□ -0.3
GGA3-203ENST00000577435 PARP9Q8IXQ6 854 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms