RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 SYCE1LA8MT33 242 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 K7EM74 188 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 SGK494L7N484 410 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 MASP2O00187 686 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 COPEO14579 308 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 CLGNO14967 610 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 ALOX12BO75342 701 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 H2AFYO75367 372 aaKnown RBP12.56□□□□□ -0.4
RPAIN-216ENST00000575599 RDH16O75452 317 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 NSA2O95478 260 aaKnown RBP12.56□□□□□ -0.4
RPAIN-216ENST00000575599 C1GALT1C1LP0DN25 315 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 GFAPP14136 432 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 MMP11P24347 488 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 HPDP32754 393 aaPredicted RBP12.56□□□□□ -0.4
RPAIN-216ENST00000575599 AHRP35869 848 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 HNF4AP41235 474 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 CCT5P48643 541 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 AGTR2P50052 363 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 PWP1Q13610 501 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 RAPSNQ13702 412 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 ACAP2Q15057 778 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 XKR6Q5GH73 641 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 ATG9BQ674R7 924 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 LRRC70Q7Z2Q7 622 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 EXOC3L1Q86VI1 746 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.56□□□□□ -0.4
RPAIN-216ENST00000575599 C4orf33Q8N1A6 199 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 PLD6Q8N2A8 252 aaKnown RBP12.56□□□□□ -0.4
RPAIN-216ENST00000575599 ANKRD53Q8N9V6 530 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 RHEBL1Q8TAI7 183 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 CCT6BQ92526 530 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 ISL2Q96A47 359 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 TLCD1Q96CP7 247 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 FER1L6-AS2Q96M78 137 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 SLC25A23Q9BV35 468 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 CAPS2Q9BXY5 557 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 CD244Q9BZW8 370 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 MKKSQ9NPJ1 570 aaPredicted RBP12.56□□□□□ -0.4
RPAIN-216ENST00000575599 SEMA3GQ9NS98 782 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 C14orf105Q9NVL8 296 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 C3orf18Q9UK00 162 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 FBXL4Q9UKA2 621 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 NAALAD2Q9Y3Q0 740 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 HEMK1Q9Y5R4 338 aaPredicted RBP12.56□□□□□ -0.4
RPAIN-216ENST00000575599 HS3ST3B1Q9Y662 390 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 PIEZO2Q9H5I5 2752 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 IGLV3-12A0A075B6K2 115 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 FOXO6A8MYZ6 492 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 B8ZZF3 427 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 H0YIG0 161 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 SOCS6O14544 535 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 KLHL18O94889 574 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 IGHEP01854 428 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 ZNF888P0CJ79 500 aaPredicted RBP12.56□□□□□ -0.4
RPAIN-216ENST00000575599 CXCR2P25025 360 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 MAGEA12P43365 314 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 HERC3Q15034 1050 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 DCAF10Q5QP82 559 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 MFSD4BQ5TF39 518 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 FAAH2Q6GMR7 532 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 TMIGD1Q6UXZ0 262 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 PRICKLE2Q7Z3G6 844 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 LAPTM4BQ86VI4 370 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 PDSS2Q86YH6 399 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 ZC3H7AQ8IWR0 971 aaKnown RBP12.56□□□□□ -0.4
RPAIN-216ENST00000575599 SHISA5Q8N114 240 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 KRT78Q8N1N4 520 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 ARFGAP2Q8N6H7 521 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 CLEC1AQ8NC01 280 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 NT5CQ8TCD5 201 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 MZB1Q8WU39 189 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 UBTD2Q8WUN7 234 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 SCYL1Q96KG9 808 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 GPR78Q96P69 363 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 MESP1Q9BRJ9 268 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 PRM3Q9NNZ6 103 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 ZNF358Q9NW07 568 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 CPSF2Q9P2I0 782 aaKnown RBP12.56□□□□□ -0.4
RPAIN-216ENST00000575599 OPTCQ9UBM4 332 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 DCDC2Q9UHG0 476 aa12.56□□□□□ -0.4
RPAIN-216ENST00000575599 G3BP2Q9UN86 482 aaKnown RBP12.56□□□□□ -0.4
RPAIN-216ENST00000575599 NUP210LQ5VU65 1888 aa12.55□□□□□ -0.4
RPAIN-216ENST00000575599 SCN3AQ9NY46 2000 aa12.55□□□□□ -0.4
RPAIN-216ENST00000575599 MED13Q9UHV7 2174 aa12.55□□□□□ -0.4
RPAIN-216ENST00000575599 IDSB3KWA1 339 aa12.55□□□□□ -0.4
RPAIN-216ENST00000575599 H3BQF6 201 aa12.55□□□□□ -0.4
RPAIN-216ENST00000575599 PRAMEF4O60810 478 aa12.55□□□□□ -0.4
RPAIN-216ENST00000575599 SPAG7O75391 227 aa12.55□□□□□ -0.4
RPAIN-216ENST00000575599 JRKO75564 520 aa12.55□□□□□ -0.4
RPAIN-216ENST00000575599 B3GALT4O96024 378 aa12.55□□□□□ -0.4
RPAIN-216ENST00000575599 PDGFAP04085 211 aa12.55□□□□□ -0.4
RPAIN-216ENST00000575599 HEXBP07686 556 aa12.55□□□□□ -0.4
RPAIN-216ENST00000575599 MTHFD2P13995 350 aa12.55□□□□□ -0.4
RPAIN-216ENST00000575599 ALOX12P18054 663 aa12.55□□□□□ -0.4
RPAIN-216ENST00000575599 XCR1P46094 333 aa12.55□□□□□ -0.4
RPAIN-216ENST00000575599 PGDP52209 483 aa12.55□□□□□ -0.4
RPAIN-216ENST00000575599 EMP2P54851 167 aa12.55□□□□□ -0.4
RPAIN-216ENST00000575599 OLR1P78380 273 aa12.55□□□□□ -0.4
RPAIN-216ENST00000575599 CHIT1Q13231 466 aa12.55□□□□□ -0.4
RPAIN-216ENST00000575599 PFKFB4Q16877 469 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms