RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 PWP1Q13610 501 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 ASCL5Q7RTU5 278 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 UBE3DQ7Z6J8 389 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 METTL4Q8N3J2 472 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 LIX1Q8N485 282 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 CPSF7Q8N684 471 aaKnown RBP22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 CSNK1A1LQ8N752 337 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 MS4A6EQ96DS6 147 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 CCDC106Q9BWC9 280 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 ZNF768Q9H5H4 540 aaKnown RBP22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 STARD5Q9NSY2 213 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 EP300Q09472 2414 aaPredicted RBP22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 A0A0G2JN53 185 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 NTN3O00634 580 aaPredicted RBP22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 FOXD2O60548 495 aaPredicted RBP22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 SEMA3DO95025 777 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 GBAP04062 536 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 BCKDHAP12694 445 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 GABRA4P48169 554 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 STX1BP61266 288 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 SQLEQ14534 574 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 GSTA3Q16772 222 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 ADPRMQ3LIE5 342 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 TMEM35AQ53FP2 167 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 CCDC157Q569K6 752 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 RIPOR1Q6ZS17 1223 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 CAMKVQ8NCB2 501 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 RCBTB1Q8NDN9 531 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 KLHL6Q8WZ60 621 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 SLC41A2Q96JW4 573 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 FCRL1Q96LA6 429 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 CCDC74BQ96LY2 380 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 C17orf62Q9BQA9 187 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 CENPKQ9BS16 269 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 CHRNA10Q9GZZ6 450 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 PDP2Q9P2J9 529 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 BAIAP2L1Q9UHR4 511 aa22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 RUVBL1Q9Y265 456 aaKnown RBP22.91■■□□□ 1.26
ATPAF1-213ENST00000574428 D6RAR5 112 aa22.9■■□□□ 1.26
ATPAF1-213ENST00000574428 ERI3O43414 337 aaKnown RBP22.9■■□□□ 1.26
ATPAF1-213ENST00000574428 THRAP10827 490 aa22.9■■□□□ 1.26
ATPAF1-213ENST00000574428 CD1EP15812 388 aa22.9■■□□□ 1.26
ATPAF1-213ENST00000574428 SDC1P18827 310 aa22.9■■□□□ 1.26
ATPAF1-213ENST00000574428 STXBP1P61764 594 aaKnown RBP22.9■■□□□ 1.26
ATPAF1-213ENST00000574428 PTGR1Q14914 329 aa22.9■■□□□ 1.26
ATPAF1-213ENST00000574428 RPS6KA2Q15349 733 aa22.9■■□□□ 1.26
ATPAF1-213ENST00000574428 CYP20A1Q6UW02 462 aa22.9■■□□□ 1.26
ATPAF1-213ENST00000574428 TREML1Q86YW5 311 aa22.9■■□□□ 1.26
ATPAF1-213ENST00000574428 CLHC1Q8NHS4 586 aa22.9■■□□□ 1.26
ATPAF1-213ENST00000574428 RGMAQ96B86 450 aa22.9■■□□□ 1.26
ATPAF1-213ENST00000574428 METTL2AQ96IZ6 378 aaKnown RBP22.9■■□□□ 1.26
ATPAF1-213ENST00000574428 DPYSL5Q9BPU6 564 aa22.9■■□□□ 1.26
ATPAF1-213ENST00000574428 ZNF717Q9BY31 904 aaPredicted RBP22.9■■□□□ 1.26
ATPAF1-213ENST00000574428 LHX9Q9NQ69 397 aa22.9■■□□□ 1.26
ATPAF1-213ENST00000574428 ASIC5Q9NY37 505 aa22.9■■□□□ 1.26
ATPAF1-213ENST00000574428 PLCL2Q9UPR0 1127 aa22.9■■□□□ 1.26
ATPAF1-213ENST00000574428 AGRPO00253 132 aa22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 TOX3O15405 576 aaPredicted RBP22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 PCDH7O60245 1069 aa22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 MYO1DO94832 1006 aa22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 NELFEP18615 380 aaKnown RBP22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 TACR1P25103 407 aa22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 MAPK1P28482 360 aa22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 TIA1P31483 386 aaKnown RBP eCLIP22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 ATP4BP51164 291 aa22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 RAB8AP61006 207 aa22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 SNRPNP63162 240 aaKnown RBP22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 KLF10Q13118 480 aa22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 SPIDRQ14159 915 aa22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 KMT5CQ86Y97 462 aa22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 MIER2Q8N344 545 aa22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 OR2L5Q8NG80 312 aa22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 OR9I1Q8NGQ6 314 aa22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 ZCCHC10Q8TBK6 192 aa22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 CDC6Q99741 560 aa22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 BRINP2Q9C0B6 783 aa22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 SDR39U1Q9NRG7 319 aaPredicted RBP22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 AHSPQ9NZD4 102 aa22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 CAPN7Q9Y6W3 813 aa22.89■■□□□ 1.26
ATPAF1-213ENST00000574428 SPEGQ15772 3267 aa22.89■■□□□ 1.25
ATPAF1-213ENST00000574428 EEDO75530 441 aaKnown RBP22.89■■□□□ 1.25
ATPAF1-213ENST00000574428 KLK1P06870 262 aa22.89■■□□□ 1.25
ATPAF1-213ENST00000574428 GPX3P22352 226 aa22.89■■□□□ 1.25
ATPAF1-213ENST00000574428 BSGP35613 385 aa22.89■■□□□ 1.25
ATPAF1-213ENST00000574428 NCALDP61601 193 aa22.89■■□□□ 1.25
ATPAF1-213ENST00000574428 GPR19Q15760 415 aa22.89■■□□□ 1.25
ATPAF1-213ENST00000574428 CLPPQ16740 277 aaPredicted RBP22.89■■□□□ 1.25
ATPAF1-213ENST00000574428 WASHC2DQ5SRD0 308 aa22.89■■□□□ 1.25
ATPAF1-213ENST00000574428 PAOXQ6QHF9 649 aa22.89■■□□□ 1.25
ATPAF1-213ENST00000574428 ARHGAP22Q7Z5H3 698 aa22.89■■□□□ 1.25
ATPAF1-213ENST00000574428 D2HGDHQ8N465 521 aa22.89■■□□□ 1.25
ATPAF1-213ENST00000574428 ZFHX2Q9C0A1 2572 aaPredicted RBP22.88■■□□□ 1.25
ATPAF1-213ENST00000574428 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.88■■□□□ 1.25
ATPAF1-213ENST00000574428 CAPN14A8MX76 684 aa22.88■■□□□ 1.25
ATPAF1-213ENST00000574428 PSMD12O00232 456 aaPredicted RBP22.88■■□□□ 1.25
ATPAF1-213ENST00000574428 DNAJC8O75937 253 aaPredicted RBP22.88■■□□□ 1.25
ATPAF1-213ENST00000574428 B3GALT4O96024 378 aa22.88■■□□□ 1.25
ATPAF1-213ENST00000574428 ANXA4P09525 319 aaPredicted RBP22.88■■□□□ 1.25
ATPAF1-213ENST00000574428 ANKRD34CP0C6C1 535 aa22.88■■□□□ 1.25
ATPAF1-213ENST00000574428 ZNF888P0CJ79 500 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms