RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 KCNC2Q96PR1 638 aa12.91□□□□□ -0.34
NDE1-209ENST00000574109 REXO4Q9GZR2 422 aaKnown RBP12.91□□□□□ -0.34
NDE1-209ENST00000574109 COPS7BQ9H9Q2 264 aaPredicted RBP12.91□□□□□ -0.34
NDE1-209ENST00000574109 ANKHQ9HCJ1 492 aa12.91□□□□□ -0.34
NDE1-209ENST00000574109 MLXIPLQ9NP71 852 aa12.91□□□□□ -0.34
NDE1-209ENST00000574109 THAP1Q9NVV9 213 aa12.91□□□□□ -0.34
NDE1-209ENST00000574109 FOXJ2Q9P0K8 574 aa12.91□□□□□ -0.34
NDE1-209ENST00000574109 HAO1Q9UJM8 370 aa12.91□□□□□ -0.34
NDE1-209ENST00000574109 ZNF225Q9UK10 706 aa12.91□□□□□ -0.34
NDE1-209ENST00000574109 ZNF490Q9ULM2 529 aaPredicted RBP12.91□□□□□ -0.34
NDE1-209ENST00000574109 SCN3AQ9NY46 2000 aa12.91□□□□□ -0.34
NDE1-209ENST00000574109 CHD8Q9HCK8 2581 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 PMS2P1A4D2B8 440 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 LRIT2A6NDA9 550 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 AGRPO00253 132 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 FFAR3O14843 346 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 AZIN1O14977 448 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 GPR42O15529 346 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 TIAF1O95411 115 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 FGF4P08620 206 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 ALOX12P18054 663 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 TSPAN8P19075 237 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 SPINK2P20155 84 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 BGNP21810 368 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 SLC1A6P48664 564 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 RAP1GDS1P52306 607 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 BST1Q10588 318 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 DDX39BQ13838 428 aaKnown RBP12.9□□□□□ -0.34
NDE1-209ENST00000574109 DSG2Q14126 1118 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 TOR1AIP1Q5JTV8 583 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 SH2D4BQ5SQS7 431 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 KHDRBS2Q5VWX1 349 aaKnown RBP12.9□□□□□ -0.34
NDE1-209ENST00000574109 KANK2Q63ZY3 851 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 C6orf15Q6UXA7 325 aaPredicted RBP12.9□□□□□ -0.34
NDE1-209ENST00000574109 TTLL10Q6ZVT0 673 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 MARCH9Q86YJ5 346 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 CLYBLQ8N0X4 340 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 ZNF248Q8NDW4 579 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 FAM76AQ8TAV0 307 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 GATA6Q92908 595 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 PMEPA1Q969W9 287 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 METTL2AQ96IZ6 378 aaKnown RBP12.9□□□□□ -0.34
NDE1-209ENST00000574109 GBP5Q96PP8 586 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 EFHD1Q9BUP0 239 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 SPRTNQ9H040 489 aaPredicted RBP12.9□□□□□ -0.34
NDE1-209ENST00000574109 ILKAPQ9H0C8 392 aaPredicted RBP12.9□□□□□ -0.34
NDE1-209ENST00000574109 CCDC86Q9H6F5 360 aaKnown RBP12.9□□□□□ -0.34
NDE1-209ENST00000574109 MANSC1Q9H8J5 431 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 AHSPQ9NZD4 102 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 NXT1Q9UKK6 140 aaKnown RBP12.9□□□□□ -0.34
NDE1-209ENST00000574109 PADI2Q9Y2J8 665 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 RAP2CQ9Y3L5 183 aa12.9□□□□□ -0.34
NDE1-209ENST00000574109 IGF2RP11717 2491 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 MED19A0JLT2 244 aaPredicted RBP12.89□□□□□ -0.35
NDE1-209ENST00000574109 MAGEB17A8MXT2 336 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 C21orf140B9A014 251 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 SLCO1B7G3V0H7 640 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 MEN1O00255 615 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 MANBAO00462 879 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 UBFD1O14562 309 aaKnown RBP12.89□□□□□ -0.35
NDE1-209ENST00000574109 ERI3O43414 337 aaKnown RBP12.89□□□□□ -0.35
NDE1-209ENST00000574109 SNNO75324 88 aaPredicted RBP12.89□□□□□ -0.35
NDE1-209ENST00000574109 SCELO95171 688 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 ONECUT2O95948 504 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 CHRNGP07510 517 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 CYC1P08574 325 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 DCDP81605 110 aaKnown RBP12.89□□□□□ -0.35
NDE1-209ENST00000574109 SPIN4Q56A73 249 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 ZNF517Q6ZMY9 492 aaPredicted RBP12.89□□□□□ -0.35
NDE1-209ENST00000574109 RGS9BPQ6ZS82 235 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 PAGE2Q7Z2X7 111 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 VN1R5Q7Z5H4 357 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 ZCCHC10Q8TBK6 192 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 FGF11Q92914 225 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 KIAA1143Q96AT1 154 aaPredicted RBP12.89□□□□□ -0.35
NDE1-209ENST00000574109 MS4A6EQ96DS6 147 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 MAGEB18Q96M61 343 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 QRFPRQ96P65 431 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 MTERF1Q99551 399 aaKnown RBP12.89□□□□□ -0.35
NDE1-209ENST00000574109 TBCDQ9BTW9 1192 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 SPRY4Q9C004 299 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 SYNPO2LQ9H987 977 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 C14orf105Q9NVL8 296 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 NDOR1Q9UHB4 597 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 PADI1Q9ULC6 663 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 ANKRD11Q6UB99 2663 aaPredicted RBP12.89□□□□□ -0.35
NDE1-209ENST00000574109 WDFY3Q8IZQ1 3526 aa12.89□□□□□ -0.35
NDE1-209ENST00000574109 A0A1B0GTL3 188 aa12.88□□□□□ -0.35
NDE1-209ENST00000574109 SYNDIG1LA6NDD5 238 aa12.88□□□□□ -0.35
NDE1-209ENST00000574109 NPIPB8E9PQR5 432 aa12.88□□□□□ -0.35
NDE1-209ENST00000574109 PPP6CO00743 305 aa12.88□□□□□ -0.35
NDE1-209ENST00000574109 RAD1O60671 282 aa12.88□□□□□ -0.35
NDE1-209ENST00000574109 RSL1D1O76021 490 aaKnown RBP12.88□□□□□ -0.35
NDE1-209ENST00000574109 KLHL18O94889 574 aa12.88□□□□□ -0.35
NDE1-209ENST00000574109 ALBP02768 609 aa12.88□□□□□ -0.35
NDE1-209ENST00000574109 NTRK1P04629 796 aa12.88□□□□□ -0.35
NDE1-209ENST00000574109 ZNF888P0CJ79 500 aaPredicted RBP12.88□□□□□ -0.35
NDE1-209ENST00000574109 FBLP22087 321 aaKnown RBP12.88□□□□□ -0.35
NDE1-209ENST00000574109 IL10P22301 178 aa12.88□□□□□ -0.35
NDE1-209ENST00000574109 HNRNPH1P31943 449 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms