RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 CFAP157Q5JU67 520 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 ZNF678Q5SXM1 525 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 TTC19Q6DKK2 380 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 TRIM40Q6P9F5 258 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 CHSY3Q70JA7 882 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 ARHGEF39Q8N4T4 335 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 L3MBTL4Q8NA19 623 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 OR7G3Q8NG95 312 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 OR9A4Q8NGU2 314 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 OR2Y1Q8NGV0 311 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 CREB3L4Q8TEY5 395 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 ZNF483Q8TF39 744 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 GAL3ST3Q96A11 431 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 MIEF2Q96C03 454 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 L3HYPDHQ96EM0 354 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 PGM2Q96G03 612 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 SLC6A16Q9GZN6 736 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 C14orf105Q9NVL8 296 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 TRPC4Q9UBN4 977 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 EMCNQ9ULC0 261 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 ZNF490Q9ULM2 529 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 POLHQ9Y253 713 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 TSC22D4Q9Y3Q8 395 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 ACTL7BQ9Y614 415 aa12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 MRPS18BQ9Y676 258 aaKnown RBP12.12□□□□□ -0.47
TRAPPC1-206ENST00000573989 CDC14CA4D256 554 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 G3V2L1 256 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 H3BQF6 201 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 NKX2-8O15522 239 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 PRAMEF4O60810 478 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 SPAG7O75391 227 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 KLHL18O94889 574 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 MED26O95402 600 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 IGHEP01854 428 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 ZNF888P0CJ79 500 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 PRKAR1AP10644 381 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 CD22P20273 847 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 IL10P22301 178 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 DNAJB13P59910 316 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 RPS18P62269 152 aaKnown RBP12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 RHDQ02161 417 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 IFT88Q13099 833 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 CASP8Q14790 479 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 NKG7Q16617 165 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 CPSF6Q16630 551 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 UGT8Q16880 541 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 GGTA1PQ4G0N0 100 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 DEFB134Q4QY38 66 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 TOR1AIP1Q5JTV8 583 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 PRAMEF9Q5VWM5 478 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 LIPMQ5VYY2 423 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 AFAP1L2Q8N4X5 818 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 CCNYL1Q8N7R7 359 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 ARMC2Q8NEN0 867 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 UTP15Q8TED0 518 aaKnown RBP12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 TRPC4APQ8TEL6 797 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 THAP4Q8WY91 577 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 NACC2Q96BF6 587 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 MOCOSQ96EN8 888 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 CMTM7Q96FZ5 175 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 TMEM237Q96Q45 408 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 ROGDIQ9GZN7 287 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 REXO4Q9GZR2 422 aaKnown RBP12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 COPS7BQ9H9Q2 264 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 SSU72Q9NP77 194 aaKnown RBP12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 SLC22A11Q9NSA0 550 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 OXSMQ9NWU1 459 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 RNF11Q9Y3C5 154 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 NAALAD2Q9Y3Q0 740 aa12.11□□□□□ -0.47
TRAPPC1-206ENST00000573989 IGLV3-12A0A075B6K2 115 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 LRIT2A6NDA9 550 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 SGK494L7N484 410 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 OR7A17O14581 309 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 PCDH17O14917 1159 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 ERI3O43414 337 aaKnown RBP12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 GALR3O60755 368 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 KLF7O75840 302 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 ITGB2P05107 769 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 ZGLP1P0C6A0 271 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 WT1P19544 449 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 PTX3P26022 381 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 CDH13P55290 713 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 RAB8AP61006 207 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 LCP2Q13094 533 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 TRAF3Q13114 568 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 DDX39BQ13838 428 aaKnown RBP12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 COL9A2Q14055 689 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 RCN2Q14257 317 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 ZRSR2Q15696 482 aaKnown RBP12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 TMEM35AQ53FP2 167 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 UNC50Q53HI1 259 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 FRG2Q64ET8 278 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 COX15Q7KZN9 410 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 HOMEZQ8IX15 550 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 OR2L5Q8NG80 312 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 OR4F6Q8NGB9 312 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 OR52B6Q8NGF0 335 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 OR51Q1Q8NH59 317 aa12.1□□□□□ -0.47
TRAPPC1-206ENST00000573989 HUS1BQ8NHY5 278 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms