RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	HK2	P52789	917 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	PKNOX1	P55347	436 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	VSX2	P58304	361 aa	Predicted RBP	13.69	□□□□□ -0.22
ABR-223	ENST00000573895	YBX1	P67809	324 aa	Known RBP	13.69	□□□□□ -0.22
ABR-223	ENST00000573895	PCDH1	Q08174	1060 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	NAE1	Q13564	534 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	GTF2H2	Q13888	395 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	ARL13A	Q5H913	290 aa	Predicted RBP	13.69	□□□□□ -0.22
ABR-223	ENST00000573895	C1orf189	Q5VU69	101 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	MLIP	Q5VWP3	458 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	FRMPD2B	Q6IN97	320 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	GTF2H2C	Q6P1K8	395 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	MBOAT1	Q6ZNC8	495 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	ZCCHC23	Q6ZST2	131 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	FRMD7	Q6ZUT3	714 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	MED25	Q71SY5	747 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	OVCH1	Q7RTY7	1134 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	THOC6	Q86W42	341 aa	Known RBP	13.69	□□□□□ -0.22
ABR-223	ENST00000573895	RAB43	Q86YS6	212 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	TEX9	Q8N6V9	391 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	TMEM102	Q8N9M5	508 aa	Predicted RBP	13.69	□□□□□ -0.22
ABR-223	ENST00000573895	CHMP6	Q96FZ7	201 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	MAGEB10	Q96LZ2	347 aa	Predicted RBP	13.69	□□□□□ -0.22
ABR-223	ENST00000573895	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.69	□□□□□ -0.22
ABR-223	ENST00000573895	TMEM79	Q9BSE2	394 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	HAUS8	Q9BT25	410 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	SGPP1	Q9BX95	441 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	ATG10	Q9H0Y0	220 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	GSTO2	Q9H4Y5	243 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	CCDC177	Q9NQR7	707 aa	Predicted RBP	13.69	□□□□□ -0.22
ABR-223	ENST00000573895	TMEM184C	Q9NVA4	438 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	DNAJC11	Q9NVH1	559 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	GPRC5B	Q9NZH0	403 aa		13.69	□□□□□ -0.22
ABR-223	ENST00000573895	PCDHGA9	Q9Y5G4	932 aa	Known RBP	13.69	□□□□□ -0.22
ABR-223	ENST00000573895	HEMK1	Q9Y5R4	338 aa	Predicted RBP	13.69	□□□□□ -0.22
ABR-223	ENST00000573895	LOC105369274	A0A096LPK9	316 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	LOC102723532	A0A0G2JNH3	316 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	HYKK	A2RU49	373 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	TXNDC9	O14530	226 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	WDR47	O94967	919 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	ITGAX	P20702	1163 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	FOLR3	P41439	243 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	RRAD	P55042	308 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	OCRL	Q01968	901 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	LCP2	Q13094	533 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	ZXDC	Q2QGD7	858 aa	Predicted RBP	13.68	□□□□□ -0.22
ABR-223	ENST00000573895	MUM1	Q2TAK8	710 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	PRTG	Q2VWP7	1150 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	C18orf21	Q32NC0	220 aa	Predicted RBP	13.68	□□□□□ -0.22
ABR-223	ENST00000573895	LACTB2	Q53H82	288 aa	Predicted RBP	13.68	□□□□□ -0.22
ABR-223	ENST00000573895	GARNL3	Q5VVW2	1013 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	PRMT9	Q6P2P2	845 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	CRLF3	Q8IUI8	442 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	OR4N4	Q8N0Y3	316 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	PPFIBP2	Q8ND30	876 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	MVB12A	Q96EY5	273 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	OR2A5	Q96R48	311 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	NTMT1	Q9BV86	223 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	ING2	Q9H160	280 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	IPPK	Q9H8X2	491 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	SLC22A11	Q9NSA0	550 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	HAO1	Q9UJM8	370 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	SLC22A14	Q9Y267	594 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	RAP2C	Q9Y3L5	183 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	PCDHGB7	Q9Y5F8	929 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	KCNE2	Q9Y6J6	123 aa		13.68	□□□□□ -0.22
ABR-223	ENST00000573895	UBR5	O95071	2799 aa	Predicted RBP	13.68	□□□□□ -0.22
ABR-223	ENST00000573895	KCNE1B	A0A087WTH5	132 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	LRRC14B	A6NHZ5	514 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	SLCO1B7	G3V0H7	640 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895		H0YGG7	62 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	ITM2A	O43736	263 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	EDF1	O60869	148 aa	Known RBP	13.67	□□□□□ -0.22
ABR-223	ENST00000573895	CEACAM4	O75871	244 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	TGDS	O95455	350 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	OTC	P00480	354 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	FGF4	P08620	206 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	GDF5	P43026	501 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	CDH13	P55290	713 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	ARF3	P61204	181 aa	Predicted RBP	13.67	□□□□□ -0.22
ABR-223	ENST00000573895	TBPL1	P62380	186 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	TSTA3	Q13630	321 aa	Predicted RBP	13.67	□□□□□ -0.22
ABR-223	ENST00000573895	THEMIS2	Q5TEJ8	643 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	PRAMEF13	Q5VWM6	474 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	CES4A	Q5XG92	561 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	ATG14	Q6ZNE5	492 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	GOLGA7	Q7Z5G4	137 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	TRPC4AP	Q8TEL6	797 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	ATP6V1E2	Q96A05	226 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	RERG	Q96A58	199 aa	Predicted RBP	13.67	□□□□□ -0.22
ABR-223	ENST00000573895	ESAM	Q96AP7	390 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	THAP11	Q96EK4	314 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	ZNF382	Q96SR6	550 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	NSRP1	Q9H0G5	558 aa	Known RBP	13.67	□□□□□ -0.22
ABR-223	ENST00000573895	EPN3	Q9H201	632 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	ACSS2	Q9NR19	701 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	PSD3	Q9NYI0	1048 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	ANAPC2	Q9UJX6	822 aa		13.67	□□□□□ -0.22
ABR-223	ENST00000573895	NXT1	Q9UKK6	140 aa	Known RBP	13.67	□□□□□ -0.22
ABR-223	ENST00000573895	PTRH2	Q9Y3E5	179 aa	Known RBP	13.67	□□□□□ -0.22

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