RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 CCDC59Q9P031 241 aaKnown RBP18.34■□□□□ 0.53
SCARF1-206ENST00000573852 B4GALT6Q9UBX8 382 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 CORO2BQ9UQ03 480 aa18.34■□□□□ 0.53
SCARF1-206ENST00000573852 EXO1Q9UQ84 846 aaKnown RBP18.34■□□□□ 0.53
SCARF1-206ENST00000573852 ADRA2AP08913 450 aa18.33■□□□□ 0.53
SCARF1-206ENST00000573852 HSMCR30P0CW71 290 aa18.33■□□□□ 0.53
SCARF1-206ENST00000573852 ALOX12P18054 663 aa18.33■□□□□ 0.53
SCARF1-206ENST00000573852 S100A5P33763 92 aa18.33■□□□□ 0.53
SCARF1-206ENST00000573852 TEAD4Q15561 434 aa18.33■□□□□ 0.53
SCARF1-206ENST00000573852 MICAQ29983 383 aa18.33■□□□□ 0.53
SCARF1-206ENST00000573852 ZNF385BQ569K4 471 aa18.33■□□□□ 0.53
SCARF1-206ENST00000573852 ZNF648Q5T619 568 aaPredicted RBP18.33■□□□□ 0.53
SCARF1-206ENST00000573852 C10orf62Q5T681 223 aaPredicted RBP18.33■□□□□ 0.53
SCARF1-206ENST00000573852 RASGRP3Q8IV61 690 aa18.33■□□□□ 0.53
SCARF1-206ENST00000573852 HS6ST3Q8IZP7 471 aa18.33■□□□□ 0.53
SCARF1-206ENST00000573852 KBTBD8Q8NFY9 601 aa18.33■□□□□ 0.53
SCARF1-206ENST00000573852 OR9Q2Q8NGE9 314 aa18.33■□□□□ 0.53
SCARF1-206ENST00000573852 SCAMP4Q969E2 229 aa18.33■□□□□ 0.53
SCARF1-206ENST00000573852 SLX1AQ9BQ83 275 aa18.33■□□□□ 0.53
SCARF1-206ENST00000573852 CCM2Q9BSQ5 444 aa18.33■□□□□ 0.53
SCARF1-206ENST00000573852 ZDHHC6Q9H6R6 413 aa18.33■□□□□ 0.53
SCARF1-206ENST00000573852 POFUT2Q9Y2G5 429 aa18.33■□□□□ 0.53
SCARF1-206ENST00000573852 H0YIV9 168 aa18.33■□□□□ 0.52
SCARF1-206ENST00000573852 J3KTA2 159 aa18.33■□□□□ 0.52
SCARF1-206ENST00000573852 ANXA8P13928 327 aa18.33■□□□□ 0.52
SCARF1-206ENST00000573852 RCVRNP35243 200 aa18.33■□□□□ 0.52
SCARF1-206ENST00000573852 ASMTP46597 345 aa18.33■□□□□ 0.52
SCARF1-206ENST00000573852 NKX2-5P52952 324 aaPredicted RBP18.33■□□□□ 0.52
SCARF1-206ENST00000573852 IRF3Q14653 427 aa18.33■□□□□ 0.52
SCARF1-206ENST00000573852 FBXO43Q4G163 708 aa18.33■□□□□ 0.52
SCARF1-206ENST00000573852 ANXA8L1Q5VT79 327 aa18.33■□□□□ 0.52
SCARF1-206ENST00000573852 OR4K1Q8NGD4 311 aa18.33■□□□□ 0.52
SCARF1-206ENST00000573852 MS4A12Q9NXJ0 267 aa18.33■□□□□ 0.52
SCARF1-206ENST00000573852 IFT52Q9Y366 437 aa18.33■□□□□ 0.52
SCARF1-206ENST00000573852 MGAT4DA6NG13 374 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 PRRG1O14668 218 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 HAT1O14929 419 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 PTTG1O95997 202 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 POU2F1P14859 743 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 GRHL2Q6ISB3 625 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 CAMKMTQ7Z624 323 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 DENND6BQ8NEG7 585 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 CHTF18Q8WVB6 975 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 PRM3Q9NNZ6 103 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 ALPK3Q96L96 1907 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 HOXA2O43364 376 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 PCYT1AP49585 367 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 UGT2B15P54855 530 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 HBA1P69905 142 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 SF3B4Q15427 424 aaKnown RBP eCLIP18.32■□□□□ 0.524e-7■■■■■ 28.1
SCARF1-206ENST00000573852 IFI44LQ53G44 452 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 AGTRAPQ6RW13 159 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 GDPD3Q7L5L3 318 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 CYP4Z2PQ8N1L4 340 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 B3GNT7Q8NFL0 401 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 FIBINQ8TAL6 211 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 CLP1Q92989 425 aaKnown RBP18.32■□□□□ 0.52
SCARF1-206ENST00000573852 IGSF21Q96ID5 467 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 CFAP20Q9Y6A4 193 aaKnown RBP18.32■□□□□ 0.52
SCARF1-206ENST00000573852 AP1M2Q9Y6Q5 423 aa18.32■□□□□ 0.52
SCARF1-206ENST00000573852 GNG14A0A1W2PPG7 69 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 OR2AG2A6NM03 316 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 TNFRSF21O75509 655 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 FOXD4Q12950 439 aaPredicted RBP18.31■□□□□ 0.52
SCARF1-206ENST00000573852 TPGS2Q68CL5 300 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 DEPDC4Q8N2C3 294 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 OR7G3Q8NG95 312 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 HUS1BQ8NHY5 278 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 SAMD11Q96NU1 681 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 OR5M11Q96RB7 305 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 TCF25Q9BQ70 676 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 HOXD1Q9GZZ0 328 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 BRF2Q9HAW0 419 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 IL21Q9HBE4 155 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 ZNF282Q9UDV7 671 aaPredicted RBP18.31■□□□□ 0.52
SCARF1-206ENST00000573852 DUSP12Q9UNI6 340 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 PCDHGB6Q9Y5F9 930 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 PCDH17O14917 1159 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 OLFM2O95897 454 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 GSTM1P09488 218 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 HNF4AP41235 474 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 KCNC3Q14003 757 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 DOC2BQ14184 412 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 C22orf39Q6P5X5 142 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 CCBE1Q6UXH8 406 aaPredicted RBP18.31■□□□□ 0.52
SCARF1-206ENST00000573852 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.31■□□□□ 0.52
SCARF1-206ENST00000573852 DPY19L3Q6ZPD9 716 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 NLGN4XQ8N0W4 816 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 NFKBIDQ8NI38 313 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 ASZ1Q8WWH4 475 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 RMI1Q9H9A7 625 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 IMPAD1Q9NX62 359 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 CFAP97Q9P2B7 532 aa18.31■□□□□ 0.52
SCARF1-206ENST00000573852 STOX2Q9P2F5 926 aaPredicted RBP18.31■□□□□ 0.52
SCARF1-206ENST00000573852 KMOO15229 486 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 CYP4F8P98187 520 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 SPATC1Q76KD6 591 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 METTL3Q86U44 580 aaKnown RBP18.3■□□□□ 0.52
SCARF1-206ENST00000573852 LILRA3Q8N6C8 439 aaPredicted RBP18.3■□□□□ 0.52
SCARF1-206ENST00000573852 Q8N9G6 341 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms