RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 VSX2P58304 361 aaPredicted RBP6.44□□□□□ -1.38
CHD3-213ENST00000571249 DPYSQ14117 519 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 RPS6KA1Q15418 735 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 HSPB2Q16082 182 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 GLE1Q53GS7 698 aaKnown RBP6.44□□□□□ -1.38
CHD3-213ENST00000571249 WASHC2DQ5SRD0 308 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 ERMARDQ5T6L9 678 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 C11orf63Q6NUN7 778 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 FIGNL1Q6PIW4 674 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 LHFPL2Q6ZUX7 228 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 CPEB2Q7Z5Q1 589 aaKnown RBP6.44□□□□□ -1.38
CHD3-213ENST00000571249 NT5DC3Q86UY8 548 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 RASGEF1CQ8N431 466 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 SLC5A8Q8N695 610 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 NOA1Q8NC60 698 aaKnown RBP6.44□□□□□ -1.38
CHD3-213ENST00000571249 SPATA4Q8NEY3 305 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 SLC35G2Q8TBE7 412 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 STK35Q8TDR2 534 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 CTNNBL1Q8WYA6 563 aaPredicted RBP6.44□□□□□ -1.38
CHD3-213ENST00000571249 DACH2Q96NX9 599 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 PCDHB18PQ96TA0 734 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 ZFYVE21Q9BQ24 234 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 SELENOSQ9BQE4 189 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 SNRNP25Q9BV90 132 aaKnown RBP6.44□□□□□ -1.38
CHD3-213ENST00000571249 ADGRE3Q9BY15 652 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 MVB12BQ9H7P6 319 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 MAGEE1Q9HCI5 957 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 IL26Q9NPH9 171 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 C14orf105Q9NVL8 296 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 RBM22Q9NW64 420 aaKnown RBP eCLIP6.44□□□□□ -1.38
CHD3-213ENST00000571249 ZNF446Q9NWS9 450 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 PCSK1NQ9UHG2 260 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 TRHDEQ9UKU6 1024 aa6.44□□□□□ -1.38
CHD3-213ENST00000571249 KLF13Q9Y2Y9 288 aaPredicted RBP6.44□□□□□ -1.38
CHD3-213ENST00000571249 SH3D21A4FU49 640 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 KLHL33A6NCF5 533 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 SLC22A31A6NKX4 558 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 SIGLEC16A6NMB1 481 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 FAM166BA8MTA8 275 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 DEFB108AA8MXU0 73 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 GAPDHSO14556 408 aaPredicted RBP6.43□□□□□ -1.38
CHD3-213ENST00000571249 NDC80O14777 642 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 CASKO14936 926 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 AURKAO14965 403 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 TCF21O43680 179 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 ADAM11O75078 769 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 WDR1O75083 606 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 DNAJC8O75937 253 aaPredicted RBP6.43□□□□□ -1.38
CHD3-213ENST00000571249 FTLP02792 175 aaPredicted RBP6.43□□□□□ -1.38
CHD3-213ENST00000571249 IGFBP5P24593 272 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 TPP2P29144 1249 aaPredicted RBP6.43□□□□□ -1.38
CHD3-213ENST00000571249 PEBP1P30086 187 aaKnown RBP6.43□□□□□ -1.38
CHD3-213ENST00000571249 AKT1P31749 480 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 ACVR1BP36896 505 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 CD86P42081 329 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 PAFAH1B1P43034 410 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 HCAR3P49019 387 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 ITGA8P53708 1063 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 NAP1L1P55209 391 aaKnown RBP6.43□□□□□ -1.38
CHD3-213ENST00000571249 GPR85P60893 370 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 RPL7AP62424 266 aaKnown RBP6.43□□□□□ -1.38
CHD3-213ENST00000571249 SORDQ00796 357 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 AP1B1Q10567 949 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 PTP4A2Q12974 167 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 BOP1Q14137 746 aaKnown RBP6.43□□□□□ -1.38
CHD3-213ENST00000571249 SETDB1Q15047 1291 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 CLEC16AQ2KHT3 1053 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 TMEM249Q2WGJ8 235 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 CCDC38Q502W7 563 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 FAM120AOSQ5T036 256 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 FIGLAQ6QHK4 219 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 TMCO3Q6UWJ1 677 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 C20orf204Q6ZNR8 217 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 LANCL3Q6ZV70 420 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 CNTD1Q8N815 330 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 ZFP62Q8NB50 900 aaPredicted RBP6.43□□□□□ -1.38
CHD3-213ENST00000571249 DDHD1Q8NEL9 900 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 RNF217Q8TC41 542 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 M1APQ8TC57 530 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 ACTRT1Q8TDG2 376 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 METTL21AQ8WXB1 218 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 ZNF285Q96NJ3 590 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 MCEEQ96PE7 176 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 PEBP4Q96S96 227 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 RASSF4Q9H2L5 321 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 EPB41L4BQ9H329 900 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 IFT22Q9H7X7 185 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 UVRAGQ9P2Y5 699 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 REV1Q9UBZ9 1251 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 ZC3H7BQ9UGR2 993 aaKnown RBP6.43□□□□□ -1.38
CHD3-213ENST00000571249 ACAD8Q9UKU7 415 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 LIPGQ9Y5X9 500 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 NOTCH3Q9UM47 2321 aa6.43□□□□□ -1.38
CHD3-213ENST00000571249 SLC35F4A4IF30 521 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 ANKRD34BA5PLL1 514 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 OR14I1A6ND48 311 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 VSTM5A8MXK1 200 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 MIF4GDA9UHW6 222 aaKnown RBP6.42□□□□□ -1.38
CHD3-213ENST00000571249 CCDC188H7C350 402 aa6.42□□□□□ -1.38
CHD3-213ENST00000571249 ERLIN1O75477 346 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms