RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 C10orf120Q5SQS8 335 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 DCST1Q5T197 706 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 STXBP5Q5T5C0 1151 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 EEF1A1P5Q5VTE0 462 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 IRAK1BP1Q5VVH5 260 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 ARHGAP17Q68EM7 881 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 TSSK4Q6SA08 328 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 LCLAT1Q6UWP7 414 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 MMS22LQ6ZRQ5 1243 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 CLEC20AQ6ZU45 233 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 TPRG1Q6ZUI0 275 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 PAQR9Q6ZVX9 377 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 ASB18Q6ZVZ8 466 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 RSRC2Q7L4I2 434 aaKnown RBP3.83□□□□□ -1.8
NUP88-202ENST00000570937 CCDC186Q7Z3E2 898 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 R3HCC1LQ7Z5L2 792 aaKnown RBP3.83□□□□□ -1.8
NUP88-202ENST00000570937 TMEM150AQ86TG1 271 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 NFE4Q86UQ8 179 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 PIGZQ86VD9 579 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 IL17RCQ8NAC3 791 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 MSANTD4Q8NCY6 345 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 RNF139Q8WU17 664 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 INTS12Q96CB8 462 aaKnown RBP3.83□□□□□ -1.8
NUP88-202ENST00000570937 ORAI1Q96D31 301 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 OTUB2Q96DC9 234 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 MMABQ96EY8 250 aaPredicted RBP3.83□□□□□ -1.8
NUP88-202ENST00000570937 RRNAD1Q96FB5 475 aaKnown RBP3.83□□□□□ -1.8
NUP88-202ENST00000570937 HSFY1Q96LI6 401 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 HARBI1Q96MB7 349 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 PPM1MQ96MI6 270 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 QRFPRQ96P65 431 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 CYP2S1Q96SQ9 504 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 EPYCQ99645 322 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 BPIFA3Q9BQP9 254 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 PCGF1Q9BSM1 259 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 PLA2G2FQ9BZM2 168 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 MIS12Q9H081 205 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 PDCL3Q9H2J4 239 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 TBC1D17Q9HA65 648 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 SEBOXQ9HB31 216 aaPredicted RBP3.83□□□□□ -1.8
NUP88-202ENST00000570937 FBRSL1Q9HCM7 1045 aaKnown RBP3.83□□□□□ -1.8
NUP88-202ENST00000570937 GKN1Q9NS71 199 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 OLA1Q9NTK5 396 aaKnown RBP3.83□□□□□ -1.8
NUP88-202ENST00000570937 ZFP57Q9NU63 452 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 DUS2Q9NX74 493 aaKnown RBP3.83□□□□□ -1.8
NUP88-202ENST00000570937 CLIC5Q9NZA1 410 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 IL37Q9NZH6 218 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 MDFICQ9P1T7 246 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 HMGXB4Q9UGU5 601 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 LSM7Q9UK45 103 aaKnown RBP3.83□□□□□ -1.8
NUP88-202ENST00000570937 TSPAN16Q9UKR8 245 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 DLGAP4Q9Y2H0 992 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 ZNF510Q9Y2H8 683 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 NME7Q9Y5B8 376 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 PIAS3Q9Y6X2 628 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 BDP1A6H8Y1 2624 aa3.83□□□□□ -1.8
NUP88-202ENST00000570937 TTC28Q96AY4 2481 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 A0A1W2PQF6 199 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.82□□□□□ -1.8
NUP88-202ENST00000570937 SPECC1L-ADORA2AF8WAN1 911 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 GOLGA6L19H0YKK7 550 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 M0QYV0 167 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 O00370 1275 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 COCHO43405 550 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 BEST1O76090 585 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 PRAMEF12O95522 483 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 OLFM2O95897 454 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 OAS1P00973 400 aaKnown RBP3.82□□□□□ -1.8
NUP88-202ENST00000570937 TPM3P06753 285 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 ZDHHC11BP0C7U3 371 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 RARGP13631 454 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 ATP1A3P13637 1013 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 PON1P27169 355 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 BSGP35613 385 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 RPS9P46781 194 aaKnown RBP3.82□□□□□ -1.8
NUP88-202ENST00000570937 TKTL1P51854 596 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 YWHAGP61981 247 aaKnown RBP eCLIP3.82□□□□□ -1.8
NUP88-202ENST00000570937 UBXN1Q04323 297 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 TMEM115Q12893 351 aaPredicted RBP3.82□□□□□ -1.8
NUP88-202ENST00000570937 TBX2Q13207 712 aaPredicted RBP3.82□□□□□ -1.8
NUP88-202ENST00000570937 ZNF234Q14588 700 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 SYCP1Q15431 976 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 MEA1Q16626 185 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 SOWAHCQ53LP3 525 aaPredicted RBP3.82□□□□□ -1.8
NUP88-202ENST00000570937 HSP90AA4PQ58FG1 418 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 RAB41Q5JT25 222 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 PM20D1Q6GTS8 502 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 CAVIN1Q6NZI2 390 aaKnown RBP3.82□□□□□ -1.8
NUP88-202ENST00000570937 MARK2Q7KZI7 788 aaKnown RBP3.82□□□□□ -1.8
NUP88-202ENST00000570937 SLC9B2Q86UD5 537 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 CCDC13Q8IYE1 715 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 SCML4Q8N228 414 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 CIARTQ8N365 385 aaPredicted RBP3.82□□□□□ -1.8
NUP88-202ENST00000570937 METTL27Q8N6F8 245 aaPredicted RBP3.82□□□□□ -1.8
NUP88-202ENST00000570937 PCYOX1LQ8NBM8 494 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 OR13A1Q8NGR1 328 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 OR5R1Q8NH85 324 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 UBA3Q8TBC4 463 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 ZNF606Q8WXB4 792 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms