RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 TCF7L2Q9NQB0 619 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 FARSBQ9NSD9 589 aaKnown RBP6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 MRGBPQ9NV56 204 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 AHSPQ9NZD4 102 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 ZNF225Q9UK10 706 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 TSC22D4Q9Y3Q8 395 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 AP1M2Q9Y6Q5 423 aa6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 COL5A1P20908 1838 aaPredicted RBP6.29□□□□□ -1.4
CTDNEP1-204ENST00000570484 ABCA7Q8IZY2 2146 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 SPAARA0A1B0GVQ0 90 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 ATP6AP2A0A1C7CYW4 349 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 GNG14A0A1W2PPG7 69 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 MAGEB17A8MXT2 336 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 E9PBE3 544 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 AGRPO00253 132 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 NTN3O00634 580 aaPredicted RBP6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 SLC30A4O14863 429 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 KLHL41O60662 606 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 SRPX2O60687 465 aaPredicted RBP6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 PRAMEF4O60810 478 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 CTSVO60911 334 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 PEX11AO75192 247 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 SH3BGRLO75368 114 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 SEC22BO75396 215 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 ATP6AP2O75787 350 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 DCTN3O75935 186 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 OR2B3O76000 313 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 TGFB1P01137 390 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 STATHP02808 62 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 SERPINA6P08185 405 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 JMJD7P0C870 316 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 CEACAM1P13688 526 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 ALOX15P16050 662 aaPredicted RBP6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 LBPP18428 481 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 DRD4P21917 467 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 PTX3P26022 381 aaPredicted RBP6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 EPHA3P29320 983 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 CCKBRP32239 447 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 ITGA1P56199 1179 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 HMGCS1Q01581 520 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 EIF3IQ13347 325 aaKnown RBP6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 KCNAB1Q14722 419 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 GRM7Q14831 915 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 HERC3Q15034 1050 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 RPS6KA2Q15349 733 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 GPR19Q15760 415 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 ZIC1Q15915 447 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 AP5B1Q2VPB7 878 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 TMEM35AQ53FP2 167 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 XKR7Q5GH72 579 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 COX20Q5RI15 118 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 HES3Q5TGS1 186 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 VWA5B1Q5TIE3 1220 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 PRAMEF9Q5VWM5 478 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 FRMPD2BQ6IN97 320 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 ADNP2Q6IQ32 1131 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 NIPAL1Q6NVV3 410 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 DHRS13Q6UX07 377 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 TMEM126BQ8IUX1 230 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 MCATQ8IVS2 390 aaKnown RBP6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 SLITRK4Q8IW52 837 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 CACNA2D3Q8IZS8 1091 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 FAM9CQ8IZT9 166 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 D2HGDHQ8N465 521 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 CCDC197Q8NCU1 140 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 RCBTB1Q8NDN9 531 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 OR8K5Q8NH50 307 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 CEP70Q8NHQ1 597 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 RFWD2Q8NHY2 731 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 WDR20Q8TBZ3 569 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 NT5CQ8TCD5 201 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 ZNF473Q8WTR7 871 aaKnown RBP6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 NANOS1Q8WY41 292 aaKnown RBP6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 PRR11Q96HE9 360 aaPredicted RBP6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 SLC41A2Q96JW4 573 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 QRFPRQ96P65 431 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 FCRL4Q96PJ5 515 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 KCNC2Q96PR1 638 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 OR2A5Q96R48 311 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 CCT8L2Q96SF2 557 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 C17orf62Q9BQA9 187 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 NDC1Q9BTX1 674 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 CCDC28BQ9BUN5 200 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 SARGQ9BW04 601 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 MS4A8Q9BY19 250 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 REXO4Q9GZR2 422 aaKnown RBP6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 TWSG1Q9GZX9 223 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 CHRNA10Q9GZZ6 450 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 SAP130Q9H0E3 1048 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 RHBGQ9H310 441 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 OR51B5Q9H339 312 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 FGF21Q9NSA1 209 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 TXLNGQ9NUQ3 528 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 C1orf109Q9NX04 203 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 NOP53Q9NZM5 478 aaKnown RBP6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 VPS29Q9UBQ0 182 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 EGFL7Q9UHF1 273 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 RAPGEFL1Q9UHV5 662 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 SERTAD3Q9UJW9 196 aa6.28□□□□□ -1.4
CTDNEP1-204ENST00000570484 RARRES3Q9UL19 164 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms