RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 TUBA3CQ13748 450 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 ABRAXAS2Q15018 415 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 FCRLBQ6BAA4 426 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 TUBA3EQ6PEY2 450 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 RPTNQ6XPR3 784 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 MRGPRGQ86SM5 289 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 PDSS2Q86YH6 399 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 CRLF3Q8IUI8 442 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 RELL1Q8IUW5 271 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 ZNF808Q8N4W9 903 aaPredicted RBP12.36□□□□□ -0.43
SPG7-221ENST00000569720 SLC5A8Q8N695 610 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 TMEM178AQ8NBL3 297 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 FAM98AQ8NCA5 519 aaKnown RBP12.36□□□□□ -0.43
SPG7-221ENST00000569720 PEX11GQ96HA9 241 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 CCDC120Q96HB5 630 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 TRIM51Q9BSJ1 452 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 PPANQ9NQ55 473 aaKnown RBP12.36□□□□□ -0.43
SPG7-221ENST00000569720 ARL15Q9NXU5 204 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 DMGDHQ9UI17 866 aaKnown RBP12.36□□□□□ -0.43
SPG7-221ENST00000569720 SH3BGRL2Q9UJC5 107 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 SNX24Q9Y343 169 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 PCNX1Q96RV3 2341 aa12.36□□□□□ -0.43
SPG7-221ENST00000569720 TRBC2A0A5B9 178 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 OR2W5A6NFC9 320 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 ZNF860A6NHJ4 632 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 MAGEB17A8MXT2 336 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 FAM227AF5H4B4 570 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 CDK2AP1O14519 115 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 CTIFO43310 598 aaKnown RBP12.35□□□□□ -0.43
SPG7-221ENST00000569720 CDC123O75794 336 aaPredicted RBP12.35□□□□□ -0.43
SPG7-221ENST00000569720 AHSGP02765 367 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 SERPIND1P05546 499 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 FHP07954 510 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 ESRRAP11474 423 aaPredicted RBP12.35□□□□□ -0.43
SPG7-221ENST00000569720 ALOX12P18054 663 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 ITGA8P53708 1063 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 CDKN2DP55273 166 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 OR4D2P58180 307 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 TIAL1Q01085 375 aaKnown RBP eCLIP12.35□□□□□ -0.43
SPG7-221ENST00000569720 RHAGQ02094 409 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 OC90Q02509 493 aaPredicted RBP12.35□□□□□ -0.43
SPG7-221ENST00000569720 RGS1Q08116 209 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 ILF2Q12905 390 aaKnown RBP12.35□□□□□ -0.43
SPG7-221ENST00000569720 USP10Q14694 798 aaKnown RBP12.35□□□□□ -0.43
SPG7-221ENST00000569720 SLMAPQ14BN4 828 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 OR1C1Q15619 314 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 PHKG1Q16816 387 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 KRTCAP3Q53RY4 240 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 RBM20Q5T481 1227 aaKnown RBP12.35□□□□□ -0.43
SPG7-221ENST00000569720 ABHD13Q7L211 337 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 GALNT7Q86SF2 657 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 CNTN4Q8IWV2 1026 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 MCEMP1Q8IX19 187 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 AMER2Q8N7J2 671 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 ABHD11Q8NFV4 315 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 MYRIPQ8NFW9 859 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 ITLN2Q8WWU7 325 aaPredicted RBP12.35□□□□□ -0.43
SPG7-221ENST00000569720 TBC1D20Q96BZ9 403 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 PYCR2Q96C36 320 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 CERS2Q96G23 380 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 MAGED4Q96JG8 741 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 PKNOX2Q96KN3 472 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 SARGQ9BW04 601 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 RBCK1Q9BYM8 510 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 UNKQ9C0B0 810 aaKnown RBP12.35□□□□□ -0.43
SPG7-221ENST00000569720 CHST11Q9NPF2 352 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 KLHL1Q9NR64 748 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 RAB21Q9UL25 225 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 CORO1CQ9ULV4 474 aaPredicted RBP12.35□□□□□ -0.43
SPG7-221ENST00000569720 CSMD1Q96PZ7 3565 aa12.35□□□□□ -0.43
SPG7-221ENST00000569720 GTF3C1Q12789 2109 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 URADA6NGE7 173 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 GABRR3A8MPY1 467 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 GALR3O60755 368 aaPredicted RBP12.34□□□□□ -0.43
SPG7-221ENST00000569720 SLC19A2O60779 497 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 ENO2P09104 434 aaPredicted RBP12.34□□□□□ -0.43
SPG7-221ENST00000569720 GSTA2P09210 222 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 RHOXF2BP0C7M4 288 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 GABRB3P28472 473 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 CD96P40200 585 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 PLTPP55058 493 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 SLC26A5P58743 744 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 SLC7A5Q01650 507 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 MEF2AQ02078 507 aaPredicted RBP12.34□□□□□ -0.43
SPG7-221ENST00000569720 ALDH6A1Q02252 535 aaKnown RBP12.34□□□□□ -0.43
SPG7-221ENST00000569720 SRSF11Q05519 484 aaKnown RBP12.34□□□□□ -0.43
SPG7-221ENST00000569720 CSHL1Q14406 222 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 BBS9Q3SYG4 887 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 FAM45BPQ6NSW5 357 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 XKRXQ6PP77 449 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 BNC2Q6ZN30 1099 aaPredicted RBP12.34□□□□□ -0.43
SPG7-221ENST00000569720 LGI4Q8N135 537 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 AFAP1L2Q8N4X5 818 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 GPATCH11Q8N954 259 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 ZNF740Q8NDX6 193 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 MDS2Q8NDY4 140 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 OR4K1Q8NGD4 311 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 OR5T3Q8NGG3 340 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 OR56A3Q8NH54 315 aa12.34□□□□□ -0.43
SPG7-221ENST00000569720 FAM45AQ8TCE6 357 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms