RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 MPP5Q8N3R9 675 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 FBXW8Q8N3Y1 598 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 AMER2Q8N7J2 671 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 PSD4Q8NDX1 1056 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 OR2M7Q8NG81 312 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 SMPDL3BQ92485 455 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 ZNF592Q92610 1267 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 PEX11GQ96HA9 241 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 Q96MF0 132 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 PTCHD1Q96NR3 888 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 FAM173AQ9BQD7 235 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 PACSIN1Q9BY11 444 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 PCBD2Q9H0N5 130 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 EXO5Q9H790 373 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 IL1RL2Q9HB29 575 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 ZNHIT6Q9NWK9 470 aaKnown RBP8.08□□□□□ -1.12
SMG1-216ENST00000569122 SAMD15Q9P1V8 674 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 TRPS1Q9UHF7 1281 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 FBXW2Q9UKT8 454 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 EIF3LQ9Y262 564 aaKnown RBP8.08□□□□□ -1.12
SMG1-216ENST00000569122 NFS1Q9Y697 457 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 CPAMD8Q8IZJ3 1885 aa8.08□□□□□ -1.12
SMG1-216ENST00000569122 MACROD2A1Z1Q3 448 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 OR2W5A6NFC9 320 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 ERI2A8K979 691 aaKnown RBP8.07□□□□□ -1.12
SMG1-216ENST00000569122 FAM166BA8MTA8 275 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 AHRRA9YTQ3 701 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 H7BY64 318 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 SMAPO00193 183 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 CASKO14936 926 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 NDUFS3O75489 264 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 ZFAND5O76080 213 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 IL2RAP01589 272 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 CHRM3P20309 590 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 FPR1P21462 350 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 CNR1P21554 472 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 RPS3P23396 243 aaKnown RBP eCLIP8.07□□□□□ -1.12
SMG1-216ENST00000569122 ADRA1DP25100 572 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 TPM4P67936 248 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 TBL3Q12788 808 aaKnown RBP8.07□□□□□ -1.12
SMG1-216ENST00000569122 CDH17Q12864 832 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 CBLBQ13191 982 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 TCEAL1Q15170 157 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 TERF2Q15554 542 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 PHKG1Q16816 387 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 BBS9Q3SYG4 887 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 CCSMST1Q4G0I0 132 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 TSTD2Q5T7W7 516 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 KIAA0930Q6ICG6 404 aaPredicted RBP8.07□□□□□ -1.12
SMG1-216ENST00000569122 HMBOX1Q6NT76 420 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 QSOX2Q6ZRP7 698 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 MDGA2Q7Z553 956 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 CXorf67Q86X51 503 aaPredicted RBP8.07□□□□□ -1.12
SMG1-216ENST00000569122 KRT222Q8N1A0 295 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 B3GNT7Q8NFL0 401 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 OR13J1Q8NGT2 312 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 ACTL9Q8TC94 416 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 SLC13A3Q8WWT9 602 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 ASB15Q8WXK1 588 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 TSLPQ969D9 159 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 SGCZQ96LD1 299 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 DACH2Q96NX9 599 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 PRAP1Q96NZ9 151 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 SH3GL2Q99962 352 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 HEMGNQ9BXL5 484 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 TTTY12Q9BZ98 90 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 LANCL2Q9NS86 450 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 SPTLC3Q9NUV7 552 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 KCMF1Q9P0J7 381 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 ADAM21Q9UKJ8 722 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 NAALAD2Q9Y3Q0 740 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 RTTNQ86VV8 2226 aa8.07□□□□□ -1.12
SMG1-216ENST00000569122 TRGV5A0A0B4J1U4 118 aa8.06□□□□□ -1.12
SMG1-216ENST00000569122 TRBV11-1A0A0K0K1C0 115 aa8.06□□□□□ -1.12
SMG1-216ENST00000569122 E7ENX8 843 aa8.06□□□□□ -1.12
SMG1-216ENST00000569122 PSMD12O00232 456 aaPredicted RBP8.06□□□□□ -1.12
SMG1-216ENST00000569122 DNAJB6O75190 326 aa8.06□□□□□ -1.12
SMG1-216ENST00000569122 AVILO75366 819 aa8.06□□□□□ -1.12
SMG1-216ENST00000569122 RDH16O75452 317 aa8.06□□□□□ -1.12
SMG1-216ENST00000569122 GLSO94925 669 aaPredicted RBP8.06□□□□□ -1.12
SMG1-216ENST00000569122 TJP3O95049 919 aa8.06□□□□□ -1.12
SMG1-216ENST00000569122 F12P00748 615 aaPredicted RBP8.06□□□□□ -1.12
SMG1-216ENST00000569122 TIMP3P35625 211 aa8.06□□□□□ -1.12
SMG1-216ENST00000569122 TAP2Q03519 686 aa8.06□□□□□ -1.12
SMG1-216ENST00000569122 ACVR1Q04771 509 aa8.06□□□□□ -1.12
SMG1-216ENST00000569122 HYAL4Q2M3T9 481 aa8.06□□□□□ -1.12
SMG1-216ENST00000569122 CCDC38Q502W7 563 aa8.06□□□□□ -1.12
SMG1-216ENST00000569122 PRSS41Q7RTY9 318 aa8.06□□□□□ -1.12
SMG1-216ENST00000569122 YTHDF3Q7Z739 585 aaKnown RBP8.06□□□□□ -1.12
SMG1-216ENST00000569122 ASPGQ86U10 573 aa8.06□□□□□ -1.12
SMG1-216ENST00000569122 CIARTQ8N365 385 aaPredicted RBP8.06□□□□□ -1.12
SMG1-216ENST00000569122 TBC1D19Q8N5T2 526 aa8.06□□□□□ -1.12
SMG1-216ENST00000569122 FBXO15Q8NCQ5 510 aaPredicted RBP8.06□□□□□ -1.12
SMG1-216ENST00000569122 PPHLN1Q8NEY8 458 aaKnown RBP8.06□□□□□ -1.12
SMG1-216ENST00000569122 LKAAEAR1Q8TD35 194 aa8.06□□□□□ -1.12
SMG1-216ENST00000569122 SLCO2A1Q92959 643 aa8.06□□□□□ -1.12
SMG1-216ENST00000569122 ISL2Q96A47 359 aa8.06□□□□□ -1.12
SMG1-216ENST00000569122 VMP1Q96GC9 406 aa8.06□□□□□ -1.12
SMG1-216ENST00000569122 C10orf88Q9H8K7 445 aa8.06□□□□□ -1.12
SMG1-216ENST00000569122 PRDM9Q9NQV7 894 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms