RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 SOWAHCQ53LP3 525 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 ANKRD20A8PQ5CZ79 823 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 ANKRD20A2Q5SQ80 823 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 ANKRD20A1Q5TYW2 823 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 ANKRD20A3Q5VUR7 823 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 FRG2Q64ET8 278 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 SIGIRRQ6IA17 410 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 TMEM211Q6ICI0 200 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 BRAT1Q6PJG6 821 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 TMEM270Q6UE05 265 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 ABRAXAS1Q6UWZ7 409 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 RAD9BQ6WBX8 426 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 TMEM184AQ6ZMB5 413 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 MARK2Q7KZI7 788 aaKnown RBP3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 CENPVQ7Z7K6 275 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 TMEM173Q86WV6 379 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 CNTN4Q8IWV2 1026 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 RNF168Q8IYW5 571 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 MAML2Q8IZL2 1156 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 RNF113BQ8IZP6 322 aaKnown RBP3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 SUMF1Q8NBK3 374 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 ATAD1Q8NBU5 361 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 RBM15BQ8NDT2 890 aaKnown RBP3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 OR10S1Q8NGN2 331 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 N4BP2L2Q92802 583 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 RRNAD1Q96FB5 475 aaKnown RBP3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 TMEM68Q96MH6 324 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 CASD1Q96PB1 797 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 SEPT5Q99719 369 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 PCGF1Q9BSM1 259 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 SPXQ9BT56 116 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 RPP25Q9BUL9 199 aaKnown RBP3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 CACNG6Q9BXT2 260 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 MMP28Q9H239 520 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 TBC1D17Q9HA65 648 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 RGS18Q9NS28 235 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 ZFP57Q9NU63 452 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 ABCB8Q9NUT2 735 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 SEPT10Q9P0V9 454 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 FETUBQ9UGM5 382 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 FBXW11Q9UKB1 542 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 CPSF3Q9UKF6 684 aaKnown RBP3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 ACSL5Q9ULC5 683 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 EXO1Q9UQ84 846 aaKnown RBP3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 ZDBF2Q9HCK1 2354 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 KIF26BQ2KJY2 2108 aa3.16□□□□□ -1.9
HMGB1P6-201ENST00000569046 ADAMTS9Q9P2N4 1935 aa3.15□□□□□ -1.9
HMGB1P6-201ENST00000569046 DOCK8Q8NF50 2099 aa3.15□□□□□ -1.9
HMGB1P6-201ENST00000569046 SMIM30A4D0T7 59 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 ANXA2P2A6NMY6 339 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 MAGEB17A8MXT2 336 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 C16orf97H3BN30 126 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 M0QZ92 97 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 PLOD2O00469 737 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 SPINT2O43291 252 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 CYTH3O43739 400 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 KRT86O43790 486 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 VEGFDO43915 354 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 RTN2O75298 545 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 ZWINTO95229 277 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 KCNK5O95279 499 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 CRYAAP02489 173 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 TPM2P07951 284 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 SP1P08047 785 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 FAM58BPP0C7Q3 252 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 DNASE1P24855 282 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 CASP3P42574 277 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 MATR3P43243 847 aaKnown RBP eCLIP3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 NT5C2P49902 561 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 CDH13P55290 713 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 CLDN20P56880 219 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 TAS2R38P59533 333 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 HMGN5P82970 282 aaKnown RBP3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 RUNX1T1Q06455 604 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 FOXM1Q08050 763 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 KRT81Q14533 505 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 CCDC6Q16204 474 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 SNAPC1Q16533 368 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 DECR1Q16698 335 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 UBE2SQ16763 222 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 CLLU1OSQ5K130 101 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 GFI1BQ5VTD9 330 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 TEX38Q6PEX7 206 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 METTL7BQ6UX53 244 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 GDPD4Q6W3E5 623 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 ASB18Q6ZVZ8 466 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 RABEPKQ7Z6M1 372 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 TSPAN33Q86UF1 283 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 FAM228AQ86W67 206 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 TMPRSS12Q86WS5 348 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 KMT5CQ86Y97 462 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 MRPL43Q8N983 215 aaKnown RBP3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 NHLRC2Q8NBF2 726 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 ZNF540Q8NDQ6 660 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 NEK11Q8NG66 645 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 OR13A1Q8NGR1 328 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 NR4A3Q92570 626 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 CASP10Q92851 521 aa3.15□□□□□ -1.91
HMGB1P6-201ENST00000569046 PIGTQ969N2 578 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms