RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 E2F2Q14209 437 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 RASA2Q15283 850 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 DEFB134Q4QY38 66 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 PPP1R32Q7Z5V6 425 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 RNF175Q8N4F7 328 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 AFAP1L2Q8N4X5 818 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 OR5T3Q8NGG3 340 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 OR51Q1Q8NH59 317 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 WBP1Q96G27 269 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 MESP1Q9BRJ9 268 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 EFCAB11Q9BUY7 163 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 TRIM55Q9BYV6 548 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 NOL11Q9H8H0 719 aaKnown RBP12.32□□□□□ -0.44
CNOT1-213ENST00000568158 WDR54Q9H977 334 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 PPCSQ9HAB8 311 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 ZBTB26Q9HCK0 441 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 HCN3Q9P1Z3 774 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 TMCO1Q9UM00 188 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 PLAAQ9Y263 795 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 RNF11Q9Y3C5 154 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 MAP4K5Q9Y4K4 846 aa12.32□□□□□ -0.44
CNOT1-213ENST00000568158 LRIT2A6NDA9 550 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 STX16-NPEPL1H3BU86 382 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 PPP6CO00743 305 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 OR7A17O14581 309 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 STX16O14662 325 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 PRPF4O43172 522 aaKnown RBP eCLIP12.31□□□□□ -0.445e-14■■■■■ 28.4
CNOT1-213ENST00000568158 CHST10O43529 356 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 GALR3O60755 368 aaPredicted RBP12.31□□□□□ -0.44
CNOT1-213ENST00000568158 SH3BGRLO75368 114 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 CLEC3AO75596 197 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 DNAJB5O75953 348 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 BMP10O95393 424 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 PRB1P04280 392 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 GSTA1P08263 222 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 PCNAP12004 261 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 TAC1P20366 129 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 HNRNPH1P31943 449 aaKnown RBP12.31□□□□□ -0.44
CNOT1-213ENST00000568158 EFNA3P52797 238 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 EMP2P54851 167 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 CDH13P55290 713 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 POLE2P56282 527 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 BTN3A2P78410 334 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 SLC18A2Q05940 514 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 HERC3Q15034 1050 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 UNC50Q53HI1 259 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 PAGE2BQ5JRK9 111 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 LIPJQ5W064 366 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 CPZQ66K79 652 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 FAAH2Q6GMR7 532 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 MED27Q6P2C8 311 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 RAB43Q86YS6 212 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 MYLK4Q86YV6 388 aaPredicted RBP12.31□□□□□ -0.44
CNOT1-213ENST00000568158 C4orf33Q8N1A6 199 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 MREGQ8N565 214 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 TTLQ8NG68 377 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 OR7G3Q8NG95 312 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 ATP6V1E2Q96A05 226 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 MTFMTQ96DP5 389 aaKnown RBP12.31□□□□□ -0.44
CNOT1-213ENST00000568158 CDK15Q96Q40 435 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 F2RL3Q96RI0 385 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 CRB3Q9BUF7 120 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 ROPN1BQ9BZX4 212 aaPredicted RBP12.31□□□□□ -0.44
CNOT1-213ENST00000568158 PITHD1Q9GZP4 211 aaPredicted RBP12.31□□□□□ -0.44
CNOT1-213ENST00000568158 RHBGQ9H310 441 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 ROPN1Q9HAT0 212 aaPredicted RBP12.31□□□□□ -0.44
CNOT1-213ENST00000568158 PRM3Q9NNZ6 103 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 MKKSQ9NPJ1 570 aaPredicted RBP12.31□□□□□ -0.44
CNOT1-213ENST00000568158 SEMA4BQ9NPR2 832 aaPredicted RBP12.31□□□□□ -0.44
CNOT1-213ENST00000568158 P4HTMQ9NXG6 502 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 C3orf18Q9UK00 162 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 PCTPQ9UKL6 214 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 EMCNQ9ULC0 261 aa12.31□□□□□ -0.44
CNOT1-213ENST00000568158 URADA6NGE7 173 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 SOCS6O14544 535 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 TGFB1P01137 390 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 HEXBP07686 556 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 KRT4P19013 534 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 MMP11P24347 488 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 PIK3CGP48736 1102 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 PLA2G16P53816 162 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 CPSF6Q16630 551 aaKnown RBP eCLIP12.3□□□□□ -0.44
CNOT1-213ENST00000568158 FAM219BQ5XKK7 198 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 GRHL2Q6ISB3 625 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 METTL2BQ6P1Q9 378 aaKnown RBP12.3□□□□□ -0.44
CNOT1-213ENST00000568158 ABHD13Q7L211 337 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 MRGPREQ86SM8 312 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 LCA5Q86VQ0 697 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 APLFQ8IW19 511 aaPredicted RBP12.3□□□□□ -0.44
CNOT1-213ENST00000568158 ZC3H7AQ8IWR0 971 aaKnown RBP12.3□□□□□ -0.44
CNOT1-213ENST00000568158 LAS2Q8IYD9 372 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 AMER2Q8N7J2 671 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 OR52B6Q8NGF0 335 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 ZNF473Q8WTR7 871 aaKnown RBP12.3□□□□□ -0.44
CNOT1-213ENST00000568158 C8orf44Q96CB5 159 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 MS4A6EQ96DS6 147 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 PEX11GQ96HA9 241 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 TGIF2Q9GZN2 237 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 ING2Q9H160 280 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 ACTR8Q9H981 624 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms