RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 PDLIM5Q96HC4 596 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 VPS39Q96JC1 886 aa11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 HES7Q9BYE0 225 aa11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 LANCL2Q9NS86 450 aa11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 ZFP69BQ9UJL9 534 aa11.51□□□□□ -0.57
GTF3C1-208ENST00000567843 CACNA1DQ01668 2161 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 OR5H15A6NDH6 313 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 WIPF3A6NGB9 483 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 C4orf51C9J302 202 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 E7ESA3 106 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 PCDH17O14917 1159 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 RAD51CO43502 376 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 WDR47O94967 919 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 FHP07954 510 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 SLC12A2P55011 1212 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 OR4D2P58180 307 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 BTG2P78543 158 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 REEP5Q00765 189 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 PWP1Q13610 501 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 FRG1Q14331 258 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 TOR1AIP1Q5JTV8 583 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 ACER2Q5QJU3 275 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 PLAG1Q6DJT9 500 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 FRA10AC1Q70Z53 315 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 MAMDC2Q7Z304 686 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 FJX1Q86VR8 437 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 CRLF3Q8IUI8 442 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 KIF2BQ8N4N8 673 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 AFAP1L2Q8N4X5 818 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 TBC1D19Q8N5T2 526 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 UTP15Q8TED0 518 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 CCT6BQ92526 530 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 TBC1D20Q96BZ9 403 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 PDLIM2Q96JY6 352 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 PTCHD1Q96NR3 888 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 NPAS2Q99743 824 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 SLX1AQ9BQ83 275 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 AIF1LQ9BQI0 150 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 AICDAQ9GZX7 198 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 RHOJQ9H4E5 214 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 KLHL1Q9NR64 748 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 SH3BGRL2Q9UJC5 107 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 OARD1Q9Y530 152 aa11.5□□□□□ -0.57
GTF3C1-208ENST00000567843 PRAMEF2O60811 474 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 ZG16O60844 167 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 RASAL1O95294 804 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 MAOAP21397 527 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 MST1P26927 711 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 AGTR2P50052 363 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 BTN3A2P78410 334 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 HYAL2Q12891 473 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 CALCOCO2Q13137 446 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 SLBPQ14493 270 aaKnown RBP eCLIP11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 USP10Q14694 798 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 TRADDQ15628 312 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 ZNF766Q5HY98 468 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 RPUSD3Q6P087 351 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 MYO7BQ6PIF6 2116 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 GFRALQ6UXV0 394 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 CCDC25Q86WR0 208 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 PLPP5Q8NEB5 264 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 SPATA4Q8NEY3 305 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 SUN3Q8TAQ9 357 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 NT5CQ8TCD5 201 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 SREK1Q8WXA9 508 aaKnown RBP11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 NR4A3Q92570 626 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 EXT2Q93063 718 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 ZNF354BQ96LW1 612 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 SIGLEC12Q96PQ1 595 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 LPAR4Q99677 370 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 ERP44Q9BS26 406 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 SARGQ9BW04 601 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 FAM129AQ9BZQ8 928 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 TSPAN10Q9H1Z9 355 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 PELI2Q9HAT8 420 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 TEKT2Q9UIF3 430 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 KCNE2Q9Y6J6 123 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 CREBBPQ92793 2442 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 ITPR2Q14571 2701 aa11.49□□□□□ -0.57
GTF3C1-208ENST00000567843 TRGV8A0A0C4DH27 118 aa11.48□□□□□ -0.57
GTF3C1-208ENST00000567843 MAGEB17A8MXT2 336 aa11.48□□□□□ -0.57
GTF3C1-208ENST00000567843 TAPBPO15533 448 aa11.48□□□□□ -0.57
GTF3C1-208ENST00000567843 FAM155BO75949 473 aa11.48□□□□□ -0.57
GTF3C1-208ENST00000567843 UNC5CO95185 931 aa11.48□□□□□ -0.57
GTF3C1-208ENST00000567843 AHRP35869 848 aa11.48□□□□□ -0.57
GTF3C1-208ENST00000567843 CD96P40200 585 aa11.48□□□□□ -0.57
GTF3C1-208ENST00000567843 TDGF1P3P51864 188 aa11.48□□□□□ -0.57
GTF3C1-208ENST00000567843 PLTPP55058 493 aa11.48□□□□□ -0.57
GTF3C1-208ENST00000567843 SLC26A5P58743 744 aa11.48□□□□□ -0.57
GTF3C1-208ENST00000567843 AP2B1P63010 937 aa11.48□□□□□ -0.57
GTF3C1-208ENST00000567843 OC90Q02509 493 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-208ENST00000567843 TUBA3CQ13748 450 aa11.48□□□□□ -0.57
GTF3C1-208ENST00000567843 ZNF324BQ6AW86 544 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-208ENST00000567843 SPINK14Q6IE38 97 aa11.48□□□□□ -0.57
GTF3C1-208ENST00000567843 ADNP2Q6IQ32 1131 aa11.48□□□□□ -0.57
GTF3C1-208ENST00000567843 TUBA3EQ6PEY2 450 aa11.48□□□□□ -0.57
GTF3C1-208ENST00000567843 SLCO4C1Q6ZQN7 724 aa11.48□□□□□ -0.57
GTF3C1-208ENST00000567843 ABHD13Q7L211 337 aa11.48□□□□□ -0.57
GTF3C1-208ENST00000567843 ADAMTSL2Q86TH1 951 aa11.48□□□□□ -0.57
GTF3C1-208ENST00000567843 CTAGE3PQ8IX95 158 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms