RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 CASD1Q96PB1 797 aa20.78■□□□□ 0.92
SPSB3-208ENST00000566339 SLC30A2Q9BRI3 323 aa20.78■□□□□ 0.92
SPSB3-208ENST00000566339 MRPL9Q9BYD2 267 aaKnown RBP20.78■□□□□ 0.92
SPSB3-208ENST00000566339 TPK1Q9H3S4 243 aa20.78■□□□□ 0.92
SPSB3-208ENST00000566339 ZNF221Q9UK13 617 aa20.78■□□□□ 0.92
SPSB3-208ENST00000566339 DUSP12Q9UNI6 340 aa20.78■□□□□ 0.92
SPSB3-208ENST00000566339 WBP11Q9Y2W2 641 aaKnown RBP20.78■□□□□ 0.92
SPSB3-208ENST00000566339 SLC35F4A4IF30 521 aa20.77■□□□□ 0.92
SPSB3-208ENST00000566339 CAPN5O15484 640 aaPredicted RBP20.77■□□□□ 0.92
SPSB3-208ENST00000566339 CCNKO75909 580 aa20.77■□□□□ 0.92
SPSB3-208ENST00000566339 SLITRK5O94991 958 aa20.77■□□□□ 0.92
SPSB3-208ENST00000566339 STSP08842 583 aa20.77■□□□□ 0.92
SPSB3-208ENST00000566339 LAMP1P11279 417 aa20.77■□□□□ 0.92
SPSB3-208ENST00000566339 CHMP24386 653 aa20.77■□□□□ 0.92
SPSB3-208ENST00000566339 SLC15A1P46059 708 aa20.77■□□□□ 0.92
SPSB3-208ENST00000566339 PFN3P60673 137 aa20.77■□□□□ 0.92
SPSB3-208ENST00000566339 FPGSQ05932 587 aa20.77■□□□□ 0.92
SPSB3-208ENST00000566339 CDH18Q13634 790 aa20.77■□□□□ 0.92
SPSB3-208ENST00000566339 SF3B4Q15427 424 aaKnown RBP eCLIP20.77■□□□□ 0.921e-6■■□□□ 13.7
SPSB3-208ENST00000566339 MEDAGQ5VYS4 303 aa20.77■□□□□ 0.92
SPSB3-208ENST00000566339 USP45Q70EL2 814 aa20.77■□□□□ 0.92
SPSB3-208ENST00000566339 UBQLNLQ8IYU4 475 aa20.77■□□□□ 0.92
SPSB3-208ENST00000566339 CLECL1Q8IZS7 167 aa20.77■□□□□ 0.92
SPSB3-208ENST00000566339 LGI4Q8N135 537 aa20.77■□□□□ 0.92
SPSB3-208ENST00000566339 OR52N2Q8NGI0 321 aa20.77■□□□□ 0.92
SPSB3-208ENST00000566339 CLP1Q92989 425 aaKnown RBP20.77■□□□□ 0.92
SPSB3-208ENST00000566339 SCRN2Q96FV2 425 aa20.77■□□□□ 0.92
SPSB3-208ENST00000566339 DPH2Q9BQC3 489 aaPredicted RBP20.77■□□□□ 0.92
SPSB3-208ENST00000566339 OR51E2Q9H255 320 aa20.77■□□□□ 0.92
SPSB3-208ENST00000566339 AFF4Q9UHB7 1163 aaKnown RBP20.77■□□□□ 0.92
SPSB3-208ENST00000566339 SLC22A14Q9Y267 594 aa20.77■□□□□ 0.92
SPSB3-208ENST00000566339 HCN4Q9Y3Q4 1203 aa20.77■□□□□ 0.92
SPSB3-208ENST00000566339 QSOX1O00391 747 aa20.77■□□□□ 0.91
SPSB3-208ENST00000566339 PRAMEF4O60810 478 aa20.77■□□□□ 0.91
SPSB3-208ENST00000566339 NBNO60934 754 aa20.77■□□□□ 0.91
SPSB3-208ENST00000566339 PTHP01270 115 aa20.77■□□□□ 0.91
SPSB3-208ENST00000566339 SPNP16150 400 aa20.77■□□□□ 0.91
SPSB3-208ENST00000566339 GRK5P34947 590 aa20.77■□□□□ 0.91
SPSB3-208ENST00000566339 BMPR1AP36894 532 aa20.77■□□□□ 0.91
SPSB3-208ENST00000566339 LIMS1P48059 325 aa20.77■□□□□ 0.91
SPSB3-208ENST00000566339 ACLYP53396 1101 aa20.77■□□□□ 0.91
SPSB3-208ENST00000566339 E2F2Q14209 437 aa20.77■□□□□ 0.91
SPSB3-208ENST00000566339 PRAMEF9Q5VWM5 478 aa20.77■□□□□ 0.91
SPSB3-208ENST00000566339 RSBN1Q5VWQ0 802 aaPredicted RBP20.77■□□□□ 0.91
SPSB3-208ENST00000566339 CRTC1Q6UUV9 634 aa20.77■□□□□ 0.91
SPSB3-208ENST00000566339 SPPL2AQ8TCT8 520 aa20.77■□□□□ 0.91
SPSB3-208ENST00000566339 GEMIN6Q8WXD5 167 aaKnown RBP20.77■□□□□ 0.91
SPSB3-208ENST00000566339 CEP19Q96LK0 163 aa20.77■□□□□ 0.91
SPSB3-208ENST00000566339 DEFB118Q96PH6 123 aa20.77■□□□□ 0.91
SPSB3-208ENST00000566339 MCCC1Q96RQ3 725 aaPredicted RBP20.77■□□□□ 0.91
SPSB3-208ENST00000566339 TAPBPLQ9BX59 468 aa20.77■□□□□ 0.91
SPSB3-208ENST00000566339 CLN6Q9NWW5 311 aa20.77■□□□□ 0.91
SPSB3-208ENST00000566339 FBXL12Q9NXK8 326 aa20.77■□□□□ 0.91
SPSB3-208ENST00000566339 PCDHB7Q9Y5E2 793 aa20.77■□□□□ 0.91
SPSB3-208ENST00000566339 TNFRSF21O75509 655 aa20.76■□□□□ 0.91
SPSB3-208ENST00000566339 PRKAR2AP13861 404 aaKnown RBP20.76■□□□□ 0.91
SPSB3-208ENST00000566339 IDSP22304 550 aa20.76■□□□□ 0.91
SPSB3-208ENST00000566339 GTF2E2P29084 291 aaKnown RBP20.76■□□□□ 0.91
SPSB3-208ENST00000566339 RPS5P46782 204 aaKnown RBP20.76■□□□□ 0.91
SPSB3-208ENST00000566339 B4GALNT1Q00973 533 aa20.76■□□□□ 0.91
SPSB3-208ENST00000566339 CRB2Q5IJ48 1285 aa20.76■□□□□ 0.91
SPSB3-208ENST00000566339 GCNT6Q5T4J0 391 aa20.76■□□□□ 0.91
SPSB3-208ENST00000566339 LRRC66Q68CR7 880 aa20.76■□□□□ 0.91
SPSB3-208ENST00000566339 IL17RCQ8NAC3 791 aa20.76■□□□□ 0.91
SPSB3-208ENST00000566339 SH3KBP1Q96B97 665 aa20.76■□□□□ 0.91
SPSB3-208ENST00000566339 ECHDC3Q96DC8 303 aa20.76■□□□□ 0.91
SPSB3-208ENST00000566339 MGLLQ99685 303 aa20.76■□□□□ 0.91
SPSB3-208ENST00000566339 EBPLQ9BY08 206 aa20.76■□□□□ 0.91
SPSB3-208ENST00000566339 ASAH2Q9NR71 780 aa20.76■□□□□ 0.91
SPSB3-208ENST00000566339 GPR83Q9NYM4 423 aa20.76■□□□□ 0.91
SPSB3-208ENST00000566339 LOC100506127A0A0U1RQW1 187 aa20.75■□□□□ 0.91
SPSB3-208ENST00000566339 GABRR3A8MPY1 467 aa20.75■□□□□ 0.91
SPSB3-208ENST00000566339 PSMD11O00231 422 aa20.75■□□□□ 0.91
SPSB3-208ENST00000566339 KIAA0513O60268 411 aa20.75■□□□□ 0.91
SPSB3-208ENST00000566339 GCM2O75603 506 aaPredicted RBP20.75■□□□□ 0.91
SPSB3-208ENST00000566339 PARNO95453 639 aaKnown RBP20.75■□□□□ 0.91
SPSB3-208ENST00000566339 GSTM1P09488 218 aa20.75■□□□□ 0.91
SPSB3-208ENST00000566339 DDOSTP39656 456 aa20.75■□□□□ 0.91
SPSB3-208ENST00000566339 HTR3AP46098 478 aa20.75■□□□□ 0.91
SPSB3-208ENST00000566339 SPIBQ01892 262 aa20.75■□□□□ 0.91
SPSB3-208ENST00000566339 ZNF630Q2M218 657 aaPredicted RBP20.75■□□□□ 0.91
SPSB3-208ENST00000566339 MPP7Q5T2T1 576 aa20.75■□□□□ 0.91
SPSB3-208ENST00000566339 ATCAYQ86WG3 371 aa20.75■□□□□ 0.91
SPSB3-208ENST00000566339 OXR1Q8N573 874 aa20.75■□□□□ 0.91
SPSB3-208ENST00000566339 FAM83CQ9BQN1 747 aa20.75■□□□□ 0.91
SPSB3-208ENST00000566339 CHCHD6Q9BRQ6 235 aa20.75■□□□□ 0.91
SPSB3-208ENST00000566339 CCM2Q9BSQ5 444 aa20.75■□□□□ 0.91
SPSB3-208ENST00000566339 CENPOQ9BU64 300 aa20.75■□□□□ 0.91
SPSB3-208ENST00000566339 EMILIN2Q9BXX0 1053 aa20.75■□□□□ 0.91
SPSB3-208ENST00000566339 TM6SF2Q9BZW4 377 aa20.75■□□□□ 0.91
SPSB3-208ENST00000566339 RAD18Q9NS91 495 aa20.75■□□□□ 0.91
SPSB3-208ENST00000566339 ABCB8Q9NUT2 735 aa20.75■□□□□ 0.91
SPSB3-208ENST00000566339 KIAA1671Q9BY89 1806 aa20.75■□□□□ 0.91
SPSB3-208ENST00000566339 ZAR1LA6NP61 321 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 IDH3BO43837 385 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 IRF1P10914 325 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 IDH2P48735 452 aaKnown RBP20.74■□□□□ 0.91
SPSB3-208ENST00000566339 OR2B6P58173 313 aa20.74■□□□□ 0.91
SPSB3-208ENST00000566339 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.74■□□□□ 0.91
SPSB3-208ENST00000566339 PLAG1Q6DJT9 500 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms