RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 CPAMD8Q8IZJ3 1885 aa8.45□□□□□ -1.06
VPS9D1-205ENST00000565452 ARID1AO14497 2285 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 A0A1B0GVC2 190 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 TCRBV7S2A1N4TA0A589 114 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 OR2W5A6NFC9 320 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 ERI2A8K979 691 aaKnown RBP8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 SUSD5O60279 629 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 HRGP04196 525 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 TPH1P17752 444 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 FPR1P21462 350 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 XCR1P46094 333 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 FNTAP49354 379 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 GEMP55040 296 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 CSE1LP55060 971 aaKnown RBP8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 OR4D2P58180 307 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 SLC26A5P58743 744 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 GPR85P60893 370 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 HSPA14Q0VDF9 509 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 ABRAXAS2Q15018 415 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 SIX1Q15475 284 aaPredicted RBP8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 PARP6Q2NL67 630 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 ANKRD20A2Q5SQ80 823 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 NDUFAF5Q5TEU4 345 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 ANKRD20A1Q5TYW2 823 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 ANKRD20A3Q5VUR7 823 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 KCTD11Q693B1 232 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 MAATS1Q7Z4T9 603 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 PCGF5Q86SE9 256 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 SLC22A16Q86VW1 577 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 ZNF567Q8N184 647 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 CYP4Z2PQ8N1L4 340 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 TMEM156Q8N614 296 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 MAGOHBQ96A72 148 aaKnown RBP8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 DACH2Q96NX9 599 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 TTC1Q99614 292 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 TSSK1BQ9BXA7 367 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 DEFB126Q9BYW3 111 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 ZDHHC11Q9H8X9 412 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 ZNF629Q9UEG4 869 aaPredicted RBP8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 EIF3LQ9Y262 564 aaKnown RBP8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 PRSS21Q9Y6M0 314 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 HRNRQ86YZ3 2850 aaPredicted RBP8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 MPDZO75970 2070 aa8.44□□□□□ -1.06
VPS9D1-205ENST00000565452 FEZF1A0PJY2 475 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 FAM166BA8MTA8 275 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 MAGEB17A8MXT2 336 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 CCL22O00626 93 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 AQP7O14520 342 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 NSA2O95478 260 aaKnown RBP8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 IGHG3P01860 377 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 TP53P04637 393 aaPredicted RBP8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 IL10P22301 178 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 PSMB5P28074 263 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 FDFT1P37268 417 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 COILP38432 576 aaPredicted RBP8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 MAN2A2P49641 1150 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 NR0B1P51843 470 aaKnown RBP8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 ZNF140P52738 457 aaPredicted RBP8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 SORDQ00796 357 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 MEF2AQ02078 507 aaPredicted RBP8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 RELAQ04206 551 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 DMTNQ08495 405 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 ITIH4Q14624 930 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 SLC10A1Q14973 349 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 POU4F3Q15319 338 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 DBN1Q16643 649 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 CCDC137Q6PK04 289 aaKnown RBP8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 SYDE1Q6ZW31 735 aaPredicted RBP8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 TRILQ7L0X0 811 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 MDGA2Q7Z553 956 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 KLHDC8BQ8IXV7 354 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 PIANPQ8IYJ0 282 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 KIF2BQ8N4N8 673 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 PRELID2Q8N945 189 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 CCDC89Q8N998 374 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 OR9A4Q8NGU2 314 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 GSDMBQ8TAX9 411 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 HMGCLL1Q8TB92 370 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 MAGEC3Q8TD91 643 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 C1orf54Q8WWF1 131 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 SMPDL3BQ92485 455 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 PERPQ96FX8 193 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 MS4A14Q96JA4 679 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 C16orf45Q96MC5 204 aaPredicted RBP8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 OR2A5Q96R48 311 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 GBA3Q9H227 469 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 LDAHQ9H6V9 325 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 MRPS30Q9NP92 439 aaKnown RBP8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 PAK5Q9P286 719 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 PCYOX1Q9UHG3 505 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 RSPH14Q9UHP6 348 aa8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 R3HDM2Q9Y2K5 976 aaKnown RBP8.43□□□□□ -1.06
VPS9D1-205ENST00000565452 MBD3L4A6NDZ8 208 aaPredicted RBP8.42□□□□□ -1.06
VPS9D1-205ENST00000565452 MBD3L5A6NJ08 208 aaPredicted RBP8.42□□□□□ -1.06
VPS9D1-205ENST00000565452 H7C0S8 307 aa8.42□□□□□ -1.06
VPS9D1-205ENST00000565452 AP3B1O00203 1094 aa8.42□□□□□ -1.06
VPS9D1-205ENST00000565452 TLX2O43763 284 aaPredicted RBP8.42□□□□□ -1.06
VPS9D1-205ENST00000565452 ZNF500O60304 480 aaPredicted RBP8.42□□□□□ -1.06
VPS9D1-205ENST00000565452 NRP2O60462 931 aa8.42□□□□□ -1.06
VPS9D1-205ENST00000565452 GAS8O95995 478 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms