RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 SYNDIG1Q9H7V2 258 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 NMRK1Q9NWW6 199 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 C1orf109Q9NX04 203 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 VPS29Q9UBQ0 182 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 FTSJ1Q9UET6 329 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 KLHL3Q9UH77 587 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 ZFP69BQ9UJL9 534 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 PPT2Q9UMR5 302 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 PCDHGA4Q9Y5G9 962 aa10.59□□□□□ -0.71
SF3B3-205ENST00000564899 MN1Q10571 1320 aaPredicted RBP10.58□□□□□ -0.71
SF3B3-205ENST00000564899 SLC9B1P1A6NJY1 282 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 KIF1CO43896 1103 aaKnown RBP10.58□□□□□ -0.72
SF3B3-205ENST00000564899 PRAMEF10O60809 474 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 CTSVO60911 334 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 SEC22BO75396 215 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 TGFB1P01137 390 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 C9P02748 559 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 RPLP0P05388 317 aaKnown RBP10.58□□□□□ -0.72
SF3B3-205ENST00000564899 ALDOCP09972 364 aaKnown RBP10.58□□□□□ -0.72
SF3B3-205ENST00000564899 CKMT2P17540 419 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 PTX3P26022 381 aaPredicted RBP10.58□□□□□ -0.72
SF3B3-205ENST00000564899 CCL7P80098 99 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 CFHR1Q03591 330 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 RELAQ04206 551 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 EMX2Q04743 252 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 MAD2L1Q13257 205 aaPredicted RBP10.58□□□□□ -0.72
SF3B3-205ENST00000564899 UBAP2LQ14157 1087 aaKnown RBP10.58□□□□□ -0.72
SF3B3-205ENST00000564899 SQLEQ14534 574 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 ZIC1Q15915 447 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 SMU1Q2TAY7 513 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 CACHD1Q5VU97 1274 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 FBXO42Q6P3S6 717 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 WDR74Q6RFH5 385 aaPredicted RBP10.58□□□□□ -0.72
SF3B3-205ENST00000564899 CHSY3Q70JA7 882 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 RNF44Q7L0R7 432 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 TRPM8Q7Z2W7 1104 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 ASPGQ86U10 573 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 CARFQ8N187 725 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 TRPV3Q8NET8 790 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 CREB3L4Q8TEY5 395 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 THAP11Q96EK4 314 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 TCTN2Q96GX1 697 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 APIPQ96GX9 242 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 FCRL4Q96PJ5 515 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 NUDT22Q9BRQ3 303 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 CENPKQ9BS16 269 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 C1orf50Q9BV19 199 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 MYLK2Q9H1R3 596 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 OR51B5Q9H339 312 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 LRRN3Q9H3W5 708 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 SAR1AQ9NR31 198 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 AIG1Q9NVV5 245 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 SOHLH2Q9NX45 425 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 TMEM9Q9P0T7 183 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 PILRAQ9UKJ1 303 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 ATXN7L1Q9ULK2 861 aaPredicted RBP10.58□□□□□ -0.72
SF3B3-205ENST00000564899 EIF3LQ9Y262 564 aaKnown RBP10.58□□□□□ -0.72
SF3B3-205ENST00000564899 POLR3HQ9Y535 204 aaPredicted RBP10.58□□□□□ -0.72
SF3B3-205ENST00000564899 AP1M2Q9Y6Q5 423 aa10.58□□□□□ -0.72
SF3B3-205ENST00000564899 ARID1BQ8NFD5 2236 aaPredicted RBP10.58□□□□□ -0.72
SF3B3-205ENST00000564899 IGHV5-51A0A0C4DH38 117 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 A0A1W2PQM1 296 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 CCT8L1PA6NM43 557 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 SAP18O00422 153 aaKnown RBP10.57□□□□□ -0.72
SF3B3-205ENST00000564899 EBAG9O00559 213 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 CASC3O15234 703 aaKnown RBP10.57□□□□□ -0.72
SF3B3-205ENST00000564899 NDUFS4O43181 175 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 SEMA3DO95025 777 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 CPNE6O95741 557 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 STATHP02808 62 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 IDO1P14902 403 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 MAPK1P28482 360 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 MLLT3P42568 568 aaPredicted RBP10.57□□□□□ -0.72
SF3B3-205ENST00000564899 ARL4DP49703 201 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 DIO3P55073 304 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 STX1BP61266 288 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 RGS1Q08116 209 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 ACSM2AQ08AH3 577 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 SQSTM1Q13501 440 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 CUL3Q13618 768 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 DEFB110Q30KQ9 67 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 RFTN2Q52LD8 501 aaPredicted RBP10.57□□□□□ -0.72
SF3B3-205ENST00000564899 SPIN4Q56A73 249 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 SNAP47Q5SQN1 464 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 IL23RQ5VWK5 629 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 KHDRBS2Q5VWX1 349 aaKnown RBP10.57□□□□□ -0.72
SF3B3-205ENST00000564899 ACSM2BQ68CK6 577 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 TMEM71Q6P5X7 295 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 FOXR1Q6PIV2 292 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 PRSS42Q7Z5A4 293 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 VN1R4Q7Z5H5 301 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 CLNKQ7Z7G1 428 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 CPSF7Q8N684 471 aaKnown RBP10.57□□□□□ -0.72
SF3B3-205ENST00000564899 FITM2Q8N6M3 262 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 SLC13A3Q8WWT9 602 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 RERGQ96A58 199 aaPredicted RBP10.57□□□□□ -0.72
SF3B3-205ENST00000564899 METTL2AQ96IZ6 378 aaKnown RBP10.57□□□□□ -0.72
SF3B3-205ENST00000564899 OR2A5Q96R48 311 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 MRPL1Q9BYD6 325 aaKnown RBP10.57□□□□□ -0.72
SF3B3-205ENST00000564899 ZNF385DQ9H6B1 395 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms