RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 COX10Q12887 443 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 RPA4Q13156 261 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 SCARB2Q14108 478 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 DOC2AQ14183 400 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 E2F2Q14209 437 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 ARHGAP19Q14CB8 494 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 HEPACAMQ14CZ8 416 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 SPCS2Q15005 226 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 TIGD6Q17RP2 521 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 CTU2Q2VPK5 515 aaKnown RBP7.35□□□□□ -1.23
ATXN3-249ENST00000564606 EML3Q32P44 896 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 ARMCX4Q5H9R4 360 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 CRB2Q5IJ48 1285 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 ANGPTL8Q6UXH0 198 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 CASP12Q6UXS9 341 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 LIAT1Q6ZQX7 453 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 DPPA4Q7L190 304 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 SLC39A11Q8N1S5 342 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 FAM46DQ8NEK8 389 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 TTLQ8NG68 377 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 CLHC1Q8NHS4 586 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 DYNC2LI1Q8TCX1 351 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 ZFP90Q8TF47 636 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 FRS2Q8WU20 508 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 BTN2A2Q8WVV5 523 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 WDR34Q96EX3 536 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 OTUB1Q96FW1 271 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-249ENST00000564606 APIPQ96GX9 242 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 TOX2Q96NM4 488 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 ALPK1Q96QP1 1244 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 HBEGFQ99075 208 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 PIP5K1AQ99755 562 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 TRIM8Q9BZR9 551 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 DSN1Q9H410 356 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 DPEP2Q9H4A9 486 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 C3orf14Q9HBI5 128 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 KRCC1Q9NPI7 259 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-249ENST00000564606 MIEF1Q9NQG6 463 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 FARSBQ9NSD9 589 aaKnown RBP7.35□□□□□ -1.23
ATXN3-249ENST00000564606 TRNAU1APQ9NX07 287 aaKnown RBP7.35□□□□□ -1.23
ATXN3-249ENST00000564606 TAS2R9Q9NYW1 312 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 SH3BP4Q9P0V3 963 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 ERVK-18Q9QC07 812 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 B4GALT6Q9UBX8 382 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 ZMIZ1Q9ULJ6 1067 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 STUB1Q9UNE7 303 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 GPR34Q9UPC5 381 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 ICKQ9UPZ9 632 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 RNF6Q9Y252 685 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 DLGAP4Q9Y2H0 992 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 GRIP1Q9Y3R0 1128 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 RPL36Q9Y3U8 105 aaKnown RBP7.35□□□□□ -1.23
ATXN3-249ENST00000564606 DNMT3AQ9Y6K1 912 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-249ENST00000564606 PRSS21Q9Y6M0 314 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 U3KQV3 271 aa7.35□□□□□ -1.23
ATXN3-249ENST00000564606 ZFC3H1O60293 1989 aaKnown RBP7.34□□□□□ -1.23
ATXN3-249ENST00000564606 CCRL2O00421 344 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 VEGFDO43915 354 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 GADD45GO95257 159 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 FADS2O95864 444 aaKnown RBP7.34□□□□□ -1.23
ATXN3-249ENST00000564606 C1GALT1C1LP0DN25 315 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 ELNP15502 786 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 GSTM3P21266 225 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 AGXTP21549 392 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 PRKACGP22612 351 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 KELP23276 732 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 PSMA1P25786 263 aaKnown RBP7.34□□□□□ -1.23
ATXN3-249ENST00000564606 ACVR2AP27037 513 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 FMO3P31513 532 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 POLR2IP36954 125 aaKnown RBP7.34□□□□□ -1.23
ATXN3-249ENST00000564606 CLK3P49761 638 aaKnown RBP7.34□□□□□ -1.23
ATXN3-249ENST00000564606 SGSHP51688 502 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 HMGA2P52926 109 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 ARFIP1P53367 373 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 PFN3P60673 137 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 RPS3AP61247 264 aaKnown RBP7.34□□□□□ -1.23
ATXN3-249ENST00000564606 PHC1P78364 1004 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 CDK6Q00534 326 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 PPIGQ13427 754 aaKnown RBP eCLIP7.34□□□□□ -1.23
ATXN3-249ENST00000564606 NAE1Q13564 534 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 UGT8Q16880 541 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 C18orf21Q32NC0 220 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-249ENST00000564606 IQCCQ4KMZ1 466 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 BCL7AQ4VC05 210 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 KLHL22Q53GT1 634 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 PYCR3Q53H96 274 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 ZNF805Q5CZA5 627 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 COLEC12Q5KU26 742 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 RNLSQ5VYX0 342 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 REEP3Q6NUK4 255 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 KIAA1211LQ6NV74 962 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 MBOAT1Q6ZNC8 495 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 SLC16A12Q6ZSM3 486 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 AHSA2Q719I0 299 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 CHST15Q7LFX5 561 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-249ENST00000564606 GALNT5Q7Z7M9 940 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 DSG4Q86SJ6 1040 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 AKAP14Q86UN6 197 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 ANKRD46Q86W74 232 aa7.34□□□□□ -1.23
ATXN3-249ENST00000564606 LAS2Q8IYD9 372 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms