RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 SBK2P0C263 348 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 KRT3P12035 628 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 SRD5A2P31213 254 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 SOX3P41225 446 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 OR3A2P47893 321 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 ADARP55265 1226 aaKnown RBP4.1□□□□□ -1.75
LINC00560-201ENST00000564593 XGP55808 180 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 OR1D5P58170 312 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 CSNK2BP67870 215 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 EFTUD2Q15029 972 aaKnown RBP eCLIP4.1□□□□□ -1.75
LINC00560-201ENST00000564593 ACKR1Q16570 336 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 SGCBQ16585 318 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 DUSP5Q16690 384 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 KRTAP24-1Q3LI83 254 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 AARDQ4LEZ3 155 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 IFI44LQ53G44 452 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 AGAP6Q5VW22 663 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 PRAMEF8Q5VWM4 474 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 MACC1Q6ZN28 852 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 Q6ZSR9 355 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 OR6S1Q8NH40 331 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 PSMA8Q8TAA3 256 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 MGARPQ8TDB4 240 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 ST7LQ8TDW4 575 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 SNX21Q969T3 373 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 RFT1Q96AA3 541 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 ZNF486Q96H40 463 aaPredicted RBP4.1□□□□□ -1.75
LINC00560-201ENST00000564593 TDRD1Q9BXT4 1180 aaKnown RBP4.1□□□□□ -1.75
LINC00560-201ENST00000564593 ZNF696Q9H7X3 374 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 POLKQ9UBT6 870 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 POMT2Q9UKY4 750 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 GAB2Q9UQC2 676 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 ANGPTL3Q9Y5C1 460 aa4.1□□□□□ -1.75
LINC00560-201ENST00000564593 NCAPD3P42695 1498 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 SPATA31D1Q6ZQQ2 1576 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 A0A087X0K7 114 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 MAGEB16A2A368 324 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 PRR23D1E9PI22 279 aaPredicted RBP4.09□□□□□ -1.75
LINC00560-201ENST00000564593 CACNB4O00305 520 aaPredicted RBP4.09□□□□□ -1.75
LINC00560-201ENST00000564593 KERAO60938 352 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 LETM1O95202 739 aaPredicted RBP4.09□□□□□ -1.75
LINC00560-201ENST00000564593 IGKV3-20P01619 116 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 PRR23D2P0DMB1 279 aaPredicted RBP4.09□□□□□ -1.75
LINC00560-201ENST00000564593 HLA-DPA1P20036 260 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 AADACP22760 399 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 NR0B1P51843 470 aaKnown RBP4.09□□□□□ -1.75
LINC00560-201ENST00000564593 AP1B1Q10567 949 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 RPA4Q13156 261 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 SRSF9Q13242 221 aaKnown RBP eCLIP4.09□□□□□ -1.75
LINC00560-201ENST00000564593 CDH18Q13634 790 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 ITGA9Q13797 1035 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 SGSM1Q2NKQ1 1148 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 PWWP2BQ6NUJ5 590 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 ARHGAP11AQ6P4F7 1023 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 BHLHB9Q6PI77 547 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 MAPK15Q8TD08 544 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 SAP25Q8TEE9 199 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 BCL2L2Q92843 193 aaPredicted RBP4.09□□□□□ -1.75
LINC00560-201ENST00000564593 LITAFQ99732 161 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 ACAT2Q9BWD1 397 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 ACPTQ9BZG2 426 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 WDR13Q9H1Z4 485 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 ATAD3AQ9NVI7 634 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 SATB2Q9UPW6 733 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 ZNF510Q9Y2H8 683 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 TMED7Q9Y3B3 224 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 PYGO1Q9Y3Y4 419 aa4.09□□□□□ -1.75
LINC00560-201ENST00000564593 MYH15Q9Y2K3 1946 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 A0A1W2PR80 420 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 MEIOCA2RUB1 952 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 M0R296 226 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 DDX39AO00148 427 aaKnown RBP4.08□□□□□ -1.76
LINC00560-201ENST00000564593 SLC1A7O00341 560 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 MAGEC1O60732 1142 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 PNPP00491 289 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 CFC1BP0CG36 223 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 CFC1P0CG37 223 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 NPRL3Q12980 569 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 TRA2AQ13595 282 aaKnown RBP eCLIP4.08□□□□□ -1.76
LINC00560-201ENST00000564593 RPS6KA1Q15418 735 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 KCTD11Q693B1 232 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 FIP1L1Q6UN15 594 aaKnown RBP4.08□□□□□ -1.76
LINC00560-201ENST00000564593 ASPGQ86U10 573 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 ZC3H3Q8IXZ2 948 aaKnown RBP4.08□□□□□ -1.76
LINC00560-201ENST00000564593 TMEM99Q8N816 258 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 C5orf30Q96GV9 206 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 C2orf48Q96LS8 159 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 IL12RB2Q99665 862 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 CLEC7AQ9BXN2 247 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 NAPBQ9H115 298 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 PLCXD1Q9NUJ7 323 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 PPP1R3CQ9UQK1 317 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 CLIP1P30622 1438 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 VPS8Q8N3P4 1428 aa4.08□□□□□ -1.76
LINC00560-201ENST00000564593 A0A087WZ39 114 aa4.07□□□□□ -1.76
LINC00560-201ENST00000564593 C2orf92A0A1B0GVN3 265 aa4.07□□□□□ -1.76
LINC00560-201ENST00000564593 GRID2O43424 1007 aa4.07□□□□□ -1.76
LINC00560-201ENST00000564593 CPA3P15088 417 aa4.07□□□□□ -1.76
LINC00560-201ENST00000564593 GUCY2DQ02846 1103 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms