RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 ZNF888P0CJ79 500 aaPredicted RBP18.77■□□□□ 0.6
CMTM3-207ENST00000564060 COX6A1P12074 109 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 ICAM2P13598 275 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 ZNF10P21506 573 aaPredicted RBP18.77■□□□□ 0.6
CMTM3-207ENST00000564060 JAK1P23458 1154 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 AGTR2P50052 363 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 HIST2H2ACQ16777 129 aaPredicted RBP18.77■□□□□ 0.6
CMTM3-207ENST00000564060 DEFB134Q4QY38 66 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 XKR6Q5GH73 641 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 HIST2H2AA3Q6FI13 130 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 TMEM205Q6UW68 189 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 IGFL3Q6UXB1 125 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 PARP9Q8IXQ6 854 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 KBTBD2Q8IY47 623 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.77■□□□□ 0.6
CMTM3-207ENST00000564060 UTP15Q8TED0 518 aaKnown RBP18.77■□□□□ 0.6
CMTM3-207ENST00000564060 UBE2E3Q969T4 207 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 PNPLA2Q96AD5 504 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 C8orf44Q96CB5 159 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 WDR34Q96EX3 536 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 RHOXF2Q9BQY4 288 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 VN1R1Q9GZP7 353 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 ZNF160Q9HCG1 818 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 OPTCQ9UBM4 332 aa18.77■□□□□ 0.6
CMTM3-207ENST00000564060 CPAMD8Q8IZJ3 1885 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 GCN1Q92616 2671 aaKnown RBP18.76■□□□□ 0.59
CMTM3-207ENST00000564060 IGHV1-45A0A0A0MS14 117 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 EXOC1LA0A1B0GW35 172 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 POC1B-GALNT4F8VUJ3 575 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 K7EPI3 171 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 UBXN8O00124 270 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 CLEC3AO75596 197 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 GFAPP14136 432 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 IRF9Q00978 393 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 IRF8Q02556 426 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 EEF1A2Q05639 463 aaKnown RBP18.76■□□□□ 0.59
CMTM3-207ENST00000564060 TBCCQ15814 346 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 NADK2Q4G0N4 442 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 LGSNQ5TDP6 509 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 FAAH2Q6GMR7 532 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 RIPOR1Q6ZS17 1223 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 ZADH2Q8N4Q0 377 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 CREB3L4Q8TEY5 395 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 CCT6BQ92526 530 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 GAL3ST3Q96A11 431 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 ISL2Q96A47 359 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 ESAMQ96AP7 390 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 PEX11GQ96HA9 241 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 THOC3Q96J01 351 aaKnown RBP18.76■□□□□ 0.59
CMTM3-207ENST00000564060 FAR2Q96K12 515 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 TUBB6Q9BUF5 446 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 VPS11Q9H270 941 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 EPS8L2Q9H6S3 715 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 SLAMF7Q9NQ25 335 aa18.76■□□□□ 0.59
CMTM3-207ENST00000564060 HELZ2Q9BYK8 2649 aaKnown RBP18.76■□□□□ 0.59
CMTM3-207ENST00000564060 ZNF860A6NHJ4 632 aa18.75■□□□□ 0.59
CMTM3-207ENST00000564060 TTLL8A6PVC2 850 aa18.75■□□□□ 0.59
CMTM3-207ENST00000564060 MASP2O00187 686 aa18.75■□□□□ 0.59
CMTM3-207ENST00000564060 EPB42P16452 691 aa18.75■□□□□ 0.59
CMTM3-207ENST00000564060 GMPRP36959 345 aa18.75■□□□□ 0.59
CMTM3-207ENST00000564060 GLRBP48167 497 aa18.75■□□□□ 0.59
CMTM3-207ENST00000564060 KCNC1P48547 511 aa18.75■□□□□ 0.59
CMTM3-207ENST00000564060 SNRPNP63162 240 aaKnown RBP18.75■□□□□ 0.59
CMTM3-207ENST00000564060 KCNC4Q03721 635 aa18.75■□□□□ 0.59
CMTM3-207ENST00000564060 TSNAXIP1Q2TAA8 658 aa18.75■□□□□ 0.59
CMTM3-207ENST00000564060 FBXO48Q5FWF7 155 aa18.75■□□□□ 0.59
CMTM3-207ENST00000564060 TOR1AIP1Q5JTV8 583 aa18.75■□□□□ 0.59
CMTM3-207ENST00000564060 UBAP2Q5T6F2 1119 aaKnown RBP18.75■□□□□ 0.59
CMTM3-207ENST00000564060 JMJD6Q6NYC1 403 aaPredicted RBP18.75■□□□□ 0.59
CMTM3-207ENST00000564060 TBC1D20Q96BZ9 403 aa18.75■□□□□ 0.59
CMTM3-207ENST00000564060 ZNF700Q9H0M5 742 aa18.75■□□□□ 0.59
CMTM3-207ENST00000564060 TMCO1Q9UM00 188 aa18.75■□□□□ 0.59
CMTM3-207ENST00000564060 ANGPTL3Q9Y5C1 460 aa18.75■□□□□ 0.59
CMTM3-207ENST00000564060 PSMD12O00232 456 aaPredicted RBP18.74■□□□□ 0.59
CMTM3-207ENST00000564060 JRKO75564 520 aa18.74■□□□□ 0.59
CMTM3-207ENST00000564060 UQCRHP07919 91 aa18.74■□□□□ 0.59
CMTM3-207ENST00000564060 FHP07954 510 aa18.74■□□□□ 0.59
CMTM3-207ENST00000564060 RBP1P09455 135 aa18.74■□□□□ 0.59
CMTM3-207ENST00000564060 SMIM10L1P0DMW3 83 aa18.74■□□□□ 0.59
CMTM3-207ENST00000564060 COL6A2P12110 1019 aa18.74■□□□□ 0.59
CMTM3-207ENST00000564060 HNF4AP41235 474 aa18.74■□□□□ 0.59
CMTM3-207ENST00000564060 MAGEA12P43365 314 aa18.74■□□□□ 0.59
CMTM3-207ENST00000564060 ALDH18A1P54886 795 aaKnown RBP18.74■□□□□ 0.59
CMTM3-207ENST00000564060 RAB8AP61006 207 aa18.74■□□□□ 0.59
CMTM3-207ENST00000564060 TGM3Q08188 693 aa18.74■□□□□ 0.59
CMTM3-207ENST00000564060 HYAL2Q12891 473 aa18.74■□□□□ 0.59
CMTM3-207ENST00000564060 CHIT1Q13231 466 aa18.74■□□□□ 0.59
CMTM3-207ENST00000564060 DOC2AQ14183 400 aa18.74■□□□□ 0.59
CMTM3-207ENST00000564060 SETDB1Q15047 1291 aa18.74■□□□□ 0.59
CMTM3-207ENST00000564060 SLC6A19Q695T7 634 aa18.74■□□□□ 0.59
CMTM3-207ENST00000564060 METTL2BQ6P1Q9 378 aaKnown RBP18.74■□□□□ 0.59
CMTM3-207ENST00000564060 EFCAB3Q8N7B9 438 aa18.74■□□□□ 0.59
CMTM3-207ENST00000564060 RBMXL3Q8N7X1 1067 aaKnown RBP18.74■□□□□ 0.59
CMTM3-207ENST00000564060 EIF1ADQ8N9N8 165 aaKnown RBP18.74■□□□□ 0.59
CMTM3-207ENST00000564060 PLPP5Q8NEB5 264 aa18.74■□□□□ 0.59
CMTM3-207ENST00000564060 SMIM10Q96HG1 83 aa18.74■□□□□ 0.59
CMTM3-207ENST00000564060 B3GNT3Q9Y2A9 372 aa18.74■□□□□ 0.59
CMTM3-207ENST00000564060 TNPO3Q9Y5L0 923 aaKnown RBP18.74■□□□□ 0.59
CMTM3-207ENST00000564060 CHST10O43529 356 aa18.73■□□□□ 0.59
CMTM3-207ENST00000564060 SORBS2O94875 1100 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms