RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 NSG1A0A0A6YYJ2 146 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 CYSRT1A8MQ03 144 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 J3QKU1 62 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 UBXN8O00124 270 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 RIPK2O43353 540 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 GALR3O60755 368 aaPredicted RBP12.67□□□□□ -0.38
CLK3-213ENST00000563842 CLEC3AO75596 197 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 GFAPP14136 432 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 EPB42P16452 691 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 NR1D1P20393 614 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 ZNF10P21506 573 aaPredicted RBP12.67□□□□□ -0.38
CLK3-213ENST00000563842 XCR1P46094 333 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 GLRBP48167 497 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 KCNC1P48547 511 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 ALDH18A1P54886 795 aaKnown RBP12.67□□□□□ -0.38
CLK3-213ENST00000563842 MAT1AQ00266 395 aaKnown RBP12.67□□□□□ -0.38
CLK3-213ENST00000563842 IRF9Q00978 393 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 IRF8Q02556 426 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 TBCCQ15814 346 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 SYT16Q17RD7 645 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 UBAP2Q5T6F2 1119 aaKnown RBP12.67□□□□□ -0.38
CLK3-213ENST00000563842 MFSD4BQ5TF39 518 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 METTL2BQ6P1Q9 378 aaKnown RBP12.67□□□□□ -0.38
CLK3-213ENST00000563842 NDUFAF7Q7L592 441 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 PRSS41Q7RTY9 318 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 LAPTM4BQ86VI4 370 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 UHMK1Q8TAS1 419 aaKnown RBP12.67□□□□□ -0.38
CLK3-213ENST00000563842 DCAKDQ8WVC6 231 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 ESAMQ96AP7 390 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 MOCOSQ96EN8 888 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 WDR34Q96EX3 536 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 FAR2Q96K12 515 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 NUDT9Q9BW91 350 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 RIC8BQ9NVN3 520 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 FETUBQ9UGM5 382 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 ANGPTL3Q9Y5C1 460 aa12.67□□□□□ -0.38
CLK3-213ENST00000563842 TNPO3Q9Y5L0 923 aaKnown RBP12.67□□□□□ -0.38
CLK3-213ENST00000563842 A0A1W2PQ72 361 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 TRIM49D1C9J1S8 452 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 K7EM74 188 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 FFAR3O14843 346 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 GPR42O15529 346 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 ALOX12BO75342 701 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 RDH16O75452 317 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 ZNF888P0CJ79 500 aaPredicted RBP12.66□□□□□ -0.38
CLK3-213ENST00000563842 C8orf89P0DMQ9 161 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 ICAM2P13598 275 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 JAK1P23458 1154 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 GMPRP36959 345 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 CASP2P42575 452 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 MAGEA12P43365 314 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 PIK3CGP48736 1102 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 AGTR2P50052 363 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 PCDH1Q08174 1060 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 CHIT1Q13231 466 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 DOC2AQ14183 400 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 SETDB1Q15047 1291 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 MINDY4Q4G0A6 757 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 DEFB134Q4QY38 66 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 FBXO48Q5FWF7 155 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 TOR1AIP1Q5JTV8 583 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 TEX35Q5T0J7 233 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 TMEM205Q6UW68 189 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.66□□□□□ -0.38
CLK3-213ENST00000563842 UTP15Q8TED0 518 aaKnown RBP12.66□□□□□ -0.38
CLK3-213ENST00000563842 CREB3L4Q8TEY5 395 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 CCT6BQ92526 530 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 GAL3ST3Q96A11 431 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 SCYL1Q96KG9 808 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 LHPPQ9H008 270 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 PRM3Q9NNZ6 103 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 HCN3Q9P1Z3 774 aa12.66□□□□□ -0.38
CLK3-213ENST00000563842 RP1L1Q8IWN7 2480 aaPredicted RBP12.66□□□□□ -0.38
CLK3-213ENST00000563842 BSNQ9UPA5 3926 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 LOC102723996A0A087X1L8 192 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 IQANK1A0A1B0GTG1 560 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 PSMD12O00232 456 aaPredicted RBP12.65□□□□□ -0.38
CLK3-213ENST00000563842 KLK8O60259 260 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 PDGFAP04085 211 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 SMIM10L1P0DMW3 83 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 MTHFD2P13995 350 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 TNFRSF8P28908 595 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 SERPINB1P30740 379 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 HNF4AP41235 474 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 TGM3Q08188 693 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 E2F2Q14209 437 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 NAA30Q147X3 362 aaPredicted RBP12.65□□□□□ -0.38
CLK3-213ENST00000563842 PFKFB4Q16877 469 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 TECRLQ5HYJ1 363 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 AGAP7PQ5VUJ5 663 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 FAAH2Q6GMR7 532 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 ADGRD1Q6QNK2 874 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 RIPOR1Q6ZS17 1223 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 LCA5Q86VQ0 697 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 PDSS2Q86YH6 399 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 TMEM151BQ8IW70 566 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 PARP9Q8IXQ6 854 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 KBTBD2Q8IY47 623 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 ZADH2Q8N4Q0 377 aa12.65□□□□□ -0.38
CLK3-213ENST00000563842 PLPP5Q8NEB5 264 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms