RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 CDH1P12830 882 aa17.5■□□□□ 0.39
NME3-204ENST00000563498 NPPBP16860 134 aa17.5■□□□□ 0.39
NME3-204ENST00000563498 HLCSP50747 726 aa17.5■□□□□ 0.39
NME3-204ENST00000563498 MLF1P58340 268 aa17.5■□□□□ 0.39
NME3-204ENST00000563498 KRTAP21-3Q3LHN1 58 aa17.5■□□□□ 0.39
NME3-204ENST00000563498 UGT3A1Q6NUS8 523 aa17.5■□□□□ 0.39
NME3-204ENST00000563498 C3P1Q6ZMU1 363 aa17.5■□□□□ 0.39
NME3-204ENST00000563498 STRA8Q7Z7C7 330 aa17.5■□□□□ 0.39
NME3-204ENST00000563498 KIF2BQ8N4N8 673 aa17.5■□□□□ 0.39
NME3-204ENST00000563498 ZNF740Q8NDX6 193 aa17.5■□□□□ 0.39
NME3-204ENST00000563498 OR4K1Q8NGD4 311 aa17.5■□□□□ 0.39
NME3-204ENST00000563498 FAM57AQ8TBR7 257 aa17.5■□□□□ 0.39
NME3-204ENST00000563498 TMEM125Q96AQ2 219 aa17.5■□□□□ 0.39
NME3-204ENST00000563498 HAUS8Q9BT25 410 aa17.5■□□□□ 0.39
NME3-204ENST00000563498 AARSD1Q9BTE6 412 aaKnown RBP17.5■□□□□ 0.39
NME3-204ENST00000563498 ATG10Q9H0Y0 220 aa17.5■□□□□ 0.39
NME3-204ENST00000563498 CLK4Q9HAZ1 481 aaKnown RBP17.5■□□□□ 0.39
NME3-204ENST00000563498 XAB2Q9HCS7 855 aaKnown RBP17.5■□□□□ 0.39
NME3-204ENST00000563498 NDUFS4O43181 175 aa17.49■□□□□ 0.39
NME3-204ENST00000563498 ZNHIT1O43257 154 aa17.49■□□□□ 0.39
NME3-204ENST00000563498 CHST10O43529 356 aa17.49■□□□□ 0.39
NME3-204ENST00000563498 ALOX12P18054 663 aa17.49■□□□□ 0.39
NME3-204ENST00000563498 IGFBP2P18065 325 aa17.49■□□□□ 0.39
NME3-204ENST00000563498 PTGS2P35354 604 aa17.49■□□□□ 0.39
NME3-204ENST00000563498 RGS4P49798 205 aa17.49■□□□□ 0.39
NME3-204ENST00000563498 CCR8P51685 355 aa17.49■□□□□ 0.39
NME3-204ENST00000563498 GPS1Q13098 491 aa17.49■□□□□ 0.39
NME3-204ENST00000563498 NAE1Q13564 534 aa17.49■□□□□ 0.39
NME3-204ENST00000563498 TRIP13Q15645 432 aaPredicted RBP17.49■□□□□ 0.39
NME3-204ENST00000563498 ANKRD22Q5VYY1 191 aa17.49■□□□□ 0.39
NME3-204ENST00000563498 QSOX2Q6ZRP7 698 aa17.49■□□□□ 0.39
NME3-204ENST00000563498 PALM2Q8IXS6 379 aa17.49■□□□□ 0.39
NME3-204ENST00000563498 MCUQ8NE86 351 aa17.49■□□□□ 0.39
NME3-204ENST00000563498 EEF1AKMT1Q8WVE0 214 aa17.49■□□□□ 0.39
NME3-204ENST00000563498 RBSNQ9H1K0 784 aa17.49■□□□□ 0.39
NME3-204ENST00000563498 TRMT6Q9UJA5 497 aaKnown RBP17.49■□□□□ 0.39
NME3-204ENST00000563498 FBXO5Q9UKT4 447 aa17.49■□□□□ 0.39
NME3-204ENST00000563498 KLF13Q9Y2Y9 288 aaPredicted RBP17.49■□□□□ 0.39
NME3-204ENST00000563498 MTORP42345 2549 aa17.48■□□□□ 0.39
NME3-204ENST00000563498 SAGE2PA6NJ88 616 aa17.48■□□□□ 0.39
NME3-204ENST00000563498 KLRC4-KLRK1H3BQV0 150 aa17.48■□□□□ 0.39
NME3-204ENST00000563498 FCHO1O14526 889 aa17.48■□□□□ 0.39
NME3-204ENST00000563498 PRMT3O60678 531 aa17.48■□□□□ 0.39
NME3-204ENST00000563498 HAUS5O94927 633 aa17.48■□□□□ 0.39
NME3-204ENST00000563498 PTGER1P34995 402 aa17.48■□□□□ 0.39
NME3-204ENST00000563498 ITGA8P53708 1063 aa17.48■□□□□ 0.39
NME3-204ENST00000563498 TERF1P54274 439 aa17.48■□□□□ 0.39
NME3-204ENST00000563498 DEFB134Q4QY38 66 aa17.48■□□□□ 0.39
NME3-204ENST00000563498 MBOAT1Q6ZNC8 495 aa17.48■□□□□ 0.39
NME3-204ENST00000563498 TBC1D19Q8N5T2 526 aa17.48■□□□□ 0.39
NME3-204ENST00000563498 ASB5Q8WWX0 329 aa17.48■□□□□ 0.39
NME3-204ENST00000563498 PTCHD1Q96NR3 888 aa17.48■□□□□ 0.39
NME3-204ENST00000563498 FAM167BQ9BTA0 163 aa17.48■□□□□ 0.39
NME3-204ENST00000563498 C20orf96Q9NUD7 363 aaPredicted RBP17.48■□□□□ 0.39
NME3-204ENST00000563498 ZFHX3Q15911 3703 aa17.47■□□□□ 0.39
NME3-204ENST00000563498 TRBC2A0A5B9 178 aa17.47■□□□□ 0.39
NME3-204ENST00000563498 FOXO6A8MYZ6 492 aa17.47■□□□□ 0.39
NME3-204ENST00000563498 TFECO14948 347 aaPredicted RBP17.47■□□□□ 0.39
NME3-204ENST00000563498 OR1F1O43749 312 aa17.47■□□□□ 0.39
NME3-204ENST00000563498 CEP104O60308 925 aa17.47■□□□□ 0.39
NME3-204ENST00000563498 B4GALT2O60909 372 aa17.47■□□□□ 0.39
NME3-204ENST00000563498 HIST1H2AGP0C0S8 130 aaPredicted RBP17.47■□□□□ 0.39
NME3-204ENST00000563498 HIST1H2ADP20671 130 aa17.47■□□□□ 0.39
NME3-204ENST00000563498 VPS41P49754 854 aa17.47■□□□□ 0.39
NME3-204ENST00000563498 RGS1Q08116 209 aa17.47■□□□□ 0.39
NME3-204ENST00000563498 DHX9Q08211 1270 aaKnown RBP17.47■□□□□ 0.39
NME3-204ENST00000563498 KCTD19Q17RG1 926 aaPredicted RBP17.47■□□□□ 0.39
NME3-204ENST00000563498 TMEM211Q6ICI0 200 aa17.47■□□□□ 0.39
NME3-204ENST00000563498 ABHD13Q7L211 337 aa17.47■□□□□ 0.39
NME3-204ENST00000563498 MYO1HQ8N1T3 1032 aa17.47■□□□□ 0.39
NME3-204ENST00000563498 NFAM1Q8NET5 270 aaPredicted RBP17.47■□□□□ 0.39
NME3-204ENST00000563498 C16orf52Q8NHV5 167 aa17.47■□□□□ 0.39
NME3-204ENST00000563498 NT5CQ8TCD5 201 aa17.47■□□□□ 0.39
NME3-204ENST00000563498 ALKBH8Q96BT7 664 aaKnown RBP17.47■□□□□ 0.39
NME3-204ENST00000563498 HIST1H2AHQ96KK5 128 aa17.47■□□□□ 0.39
NME3-204ENST00000563498 SERPINB12Q96P63 405 aa17.47■□□□□ 0.39
NME3-204ENST00000563498 HIST1H2AJQ99878 128 aa17.47■□□□□ 0.39
NME3-204ENST00000563498 H2AFJQ9BTM1 129 aa17.47■□□□□ 0.39
NME3-204ENST00000563498 NEU2Q9Y3R4 380 aa17.47■□□□□ 0.39
NME3-204ENST00000563498 IGKV3D-11A0A0A0MRZ8 115 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 A0A1B0GTH9 108 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 TCRBV16S1A1N1A0A5B0 115 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 DNAJB6O75190 326 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 KRT14P02533 472 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 TPOP07202 933 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 CD1EP15812 388 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 MAGEA3P43357 314 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 MEOX1P50221 254 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 OLR1P78380 273 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 TIAL1Q01085 375 aaKnown RBP eCLIP17.46■□□□□ 0.39
NME3-204ENST00000563498 PHKG1Q16816 387 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 DUPD1Q68J44 220 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 CD163Q86VB7 1156 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 SULF2Q8IWU5 870 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 CYP4X1Q8N118 509 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 MARVELD2Q8N4S9 558 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 ZFP62Q8NB50 900 aaPredicted RBP17.46■□□□□ 0.39
NME3-204ENST00000563498 OR56A3Q8NH54 315 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 LILRB4Q8NHJ6 448 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 SNF8Q96H20 258 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms