RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 HNF4AP41235 474 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 FOLR3P41439 243 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 POLE2P56282 527 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 IRF8Q02556 426 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 SLC18A2Q05940 514 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 KLC1Q07866 573 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 ATP1A4Q13733 1029 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 GTF2H2Q13888 395 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 NDUFA9Q16795 377 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 ADPRMQ3LIE5 342 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 FAM219BQ5XKK7 198 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 GTF2H2CQ6P1K8 395 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 METTL2BQ6P1Q9 378 aaKnown RBP8.09□□□□□ -1.11
UBR1-204ENST00000563239 RPS27LQ71UM5 84 aaKnown RBP8.09□□□□□ -1.11
UBR1-204ENST00000563239 UBE3DQ7Z6J8 389 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 MRGPREQ86SM8 312 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 LCA5Q86VQ0 697 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 APLFQ8IW19 511 aaPredicted RBP8.09□□□□□ -1.11
UBR1-204ENST00000563239 LAS2Q8IYD9 372 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 TBC1D19Q8N5T2 526 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 LSM14AQ8ND56 463 aaKnown RBP8.09□□□□□ -1.11
UBR1-204ENST00000563239 TRPV3Q8NET8 790 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 OR5T3Q8NGG3 340 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 APOBEC4Q8WW27 367 aaKnown RBP8.09□□□□□ -1.11
UBR1-204ENST00000563239 THAP4Q8WY91 577 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 MIEF2Q96C03 454 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 MS4A6EQ96DS6 147 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 SEC16BQ96JE7 1060 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 NSUN5Q96P11 429 aaKnown RBP8.09□□□□□ -1.11
UBR1-204ENST00000563239 QRFPRQ96P65 431 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 EFCAB11Q9BUY7 163 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 TMEM109Q9BVC6 243 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 C1QTNF3Q9BXJ4 246 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 C12orf65Q9H3J6 166 aaKnown RBP8.09□□□□□ -1.11
UBR1-204ENST00000563239 ACSS2Q9NR19 701 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 HCN3Q9P1Z3 774 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 TRPC4Q9UBN4 977 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 ZNF282Q9UDV7 671 aaPredicted RBP8.09□□□□□ -1.11
UBR1-204ENST00000563239 LGALS13Q9UHV8 139 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 PCTPQ9UKL6 214 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 TMCO1Q9UM00 188 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 MAN2B2Q9Y2E5 1009 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 NAALAD2Q9Y3Q0 740 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 MAP4K5Q9Y4K4 846 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 TNPO3Q9Y5L0 923 aaKnown RBP8.09□□□□□ -1.11
UBR1-204ENST00000563239 HS3ST3B1Q9Y662 390 aa8.09□□□□□ -1.11
UBR1-204ENST00000563239 TLDC2A0PJX2 215 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 OR2W5A6NFC9 320 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 ARGFXA6NJG6 315 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 G3V2L1 256 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 K7EM74 188 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 SMIM24O75264 130 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 RDH16O75452 317 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 CLEC3AO75596 197 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 DNAJB5O75953 348 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 C1QL1O75973 258 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 PROCP04070 461 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 PRB1P04280 392 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 MMP11P24347 488 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 CCR10P46092 362 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 AVPR1BP47901 424 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 RAB8AP61006 207 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 OLR1P78380 273 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 RGS1Q08116 209 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 CHAF1BQ13112 559 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 TRAF3Q13114 568 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 LAPTM5Q13571 262 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 HERC3Q15034 1050 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 DEFB134Q4QY38 66 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 UNC50Q53HI1 259 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 TOR1AIP1Q5JTV8 583 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 GRHL2Q6ISB3 625 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 KIRREL2Q6UWL6 708 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 PRSS58Q8IYP2 241 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 IQCKQ8N0W5 287 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 KRT78Q8N1N4 520 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 RNF175Q8N4F7 328 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 AMER2Q8N7J2 671 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 L3MBTL4Q8NA19 623 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 TTLQ8NG68 377 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 OR7G3Q8NG95 312 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 OR52B6Q8NGF0 335 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 OR51Q1Q8NH59 317 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 ZNF483Q8TF39 744 aaPredicted RBP8.08□□□□□ -1.12
UBR1-204ENST00000563239 ZNF473Q8WTR7 871 aaKnown RBP8.08□□□□□ -1.12
UBR1-204ENST00000563239 SLC39A7Q92504 469 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 MS4A8Q9BY19 250 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 NOL11Q9H8H0 719 aaKnown RBP8.08□□□□□ -1.12
UBR1-204ENST00000563239 IPPKQ9H8X2 491 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 ANKHQ9HCJ1 492 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 MKKSQ9NPJ1 570 aaPredicted RBP8.08□□□□□ -1.12
UBR1-204ENST00000563239 LANCL2Q9NS86 450 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 P4HTMQ9NXG6 502 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 DCDC2Q9UHG0 476 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 ZNF225Q9UK10 706 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 NXT1Q9UKK6 140 aaKnown RBP8.08□□□□□ -1.12
UBR1-204ENST00000563239 RNF11Q9Y3C5 154 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 TSC22D4Q9Y3Q8 395 aa8.08□□□□□ -1.12
UBR1-204ENST00000563239 TEP1Q99973 2627 aaKnown RBP8.08□□□□□ -1.12
UBR1-204ENST00000563239 A0A0G2JN53 185 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms