RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 FAM71E1Q6IPT2 247 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 FBXO42Q6P3S6 717 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 WDR5BQ86VZ2 330 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 MAML2Q8IZL2 1156 aaPredicted RBP17.23■□□□□ 0.35
COMMD4-208ENST00000563220 ARL14Q8N4G2 192 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 ZNF548Q8NEK5 533 aaPredicted RBP17.23■□□□□ 0.35
COMMD4-208ENST00000563220 BHLHE22Q8NFJ8 381 aaPredicted RBP17.23■□□□□ 0.35
COMMD4-208ENST00000563220 JADE3Q92613 823 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 NELL1Q92832 810 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 COQ8BQ96D53 544 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 ITCHQ96J02 903 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 CXorf56Q9H5V9 222 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 RMND5AQ9H871 391 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 S100A14Q9HCY8 104 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 DOLKQ9UPQ8 538 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 PCDHB14Q9Y5E9 798 aa17.23■□□□□ 0.35
COMMD4-208ENST00000563220 A0A1B0GVT2 93 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 OR2A25A4D2G3 310 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 ZW10O43264 779 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 AQP9O43315 295 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 SDC3O75056 442 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 HOXB9P17482 250 aaPredicted RBP17.22■□□□□ 0.35
COMMD4-208ENST00000563220 GSK3BP49841 420 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 C2orf80Q0P641 193 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 ZNF385BQ569K4 471 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 RUNDC3AQ59EK9 446 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 CCNYL2Q5T2Q4 361 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 LRIF1Q5T3J3 769 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 CPTPQ5TA50 214 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 FCRL6Q6DN72 434 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 MSANTD1Q6ZTZ1 278 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 CAMKMTQ7Z624 323 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 RBM12BQ8IXT5 1001 aaKnown RBP17.22■□□□□ 0.35
COMMD4-208ENST00000563220 TMEM132CQ8N3T6 1108 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 AMER3Q8N944 861 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 RGMAQ96B86 450 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 DUSP26Q9BV47 211 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 KLHL25Q9H0H3 589 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 REEP4Q9H6H4 257 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 MYNNQ9NPC7 610 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 UCKL1Q9NWZ5 548 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 STX18Q9P2W9 335 aaKnown RBP17.22■□□□□ 0.35
COMMD4-208ENST00000563220 ATP6V1HQ9UI12 483 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 USP22Q9UPT9 525 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 ENTPD2Q9Y5L3 495 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 SDK1Q7Z5N4 2213 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 A0A096LPI6 279 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 C15orf38-AP3S2A0A0A6YYH1 394 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 A0A0G2JN53 185 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 C2orf74A8MZ97 194 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 LAMTOR5O43504 91 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 NOBOXO60393 691 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 FKBP6O75344 327 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 ERN1O75460 977 aaKnown RBP17.22■□□□□ 0.35
COMMD4-208ENST00000563220 GSNP06396 782 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 RPSAP08865 295 aaKnown RBP17.22■□□□□ 0.35
COMMD4-208ENST00000563220 PLA2G16P53816 162 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 EEFSECP57772 596 aaKnown RBP17.22■□□□□ 0.35
COMMD4-208ENST00000563220 DEFB133Q30KQ1 61 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 ADPRMQ3LIE5 342 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.22■□□□□ 0.35
COMMD4-208ENST00000563220 AAGABQ6PD74 315 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 FIGLAQ6QHK4 219 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 SPESP1Q6UW49 350 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 ZNF438Q7Z4V0 828 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 ARPINQ7Z6K5 226 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 IFNEQ86WN2 208 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 MMP21Q8N119 569 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 TBC1D19Q8N5T2 526 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 TRPV3Q8NET8 790 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 OR8J3Q8NGG0 315 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 STARD8Q92502 1023 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 ALG2Q9H553 416 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 IKZF5Q9H5V7 419 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 EVA1BQ9NVM1 165 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 SH3BP4Q9P0V3 963 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 MAPRE3Q9UPY8 281 aa17.22■□□□□ 0.35
COMMD4-208ENST00000563220 C4orf51C9J302 202 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 LMO7DNF2Z398 122 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 CAPN5O15484 640 aaPredicted RBP17.21■□□□□ 0.35
COMMD4-208ENST00000563220 PRAMEF10O60809 474 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 CTSVO60911 334 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 PIAS2O75928 621 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 IL3P08700 152 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 FURINP09958 794 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 TYRP1P17643 537 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 EFNA1P20827 205 aaPredicted RBP17.21■□□□□ 0.35
COMMD4-208ENST00000563220 GSTM2P28161 218 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 HPCAL1P37235 193 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 PPP1CAP62136 330 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 CSTF1Q05048 431 aaKnown RBP17.21■□□□□ 0.35
COMMD4-208ENST00000563220 PRSS53Q2L4Q9 553 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 SPATS1Q496A3 300 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 TJAP1Q5JTD0 557 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 OR4C11Q6IEV9 310 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 PAGE2Q7Z2X7 111 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 VN1R4Q7Z5H5 301 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 CLECL1Q8IZS7 167 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 DNAJB8Q8NHS0 232 aa17.21■□□□□ 0.35
COMMD4-208ENST00000563220 RSC1A1Q92681 617 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms