RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 ZFYVE21Q9BQ24 234 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 ROGDIQ9GZN7 287 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 REXO4Q9GZR2 422 aaKnown RBP13.64□□□□□ -0.23
COMMD4-205ENST00000562310 FAM120CQ9NX05 1096 aaKnown RBP13.64□□□□□ -0.23
COMMD4-205ENST00000562310 EPHA6Q9UF33 1036 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 KNL1Q8NG31 2342 aa13.64□□□□□ -0.23
COMMD4-205ENST00000562310 BDP1A6H8Y1 2624 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 A0A088AWK7 358 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 URADA6NGE7 173 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 KLK1P06870 262 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 COX7A2P14406 83 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 GLB1P16278 677 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 TYRP1P17643 537 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 CDH3P22223 829 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 HNRNPH1P31943 449 aaKnown RBP13.63□□□□□ -0.23
COMMD4-205ENST00000562310 BSGP35613 385 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 SSR2P43308 183 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 MAPK12P53778 367 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 MTTPP55157 894 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 ELF3P78545 371 aaPredicted RBP13.63□□□□□ -0.23
COMMD4-205ENST00000562310 BNIP3Q12983 259 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 MAPKAPK3Q16644 382 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 HLA-BQ31612 363 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 TOR1AIP1Q5JTV8 583 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 CCNYL2Q5T2Q4 361 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 TRIM40Q6P9F5 258 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 PGM2L1Q6PCE3 622 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 SLC23A3Q6PIS1 610 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 NET1Q7Z628 596 aaPredicted RBP13.63□□□□□ -0.23
COMMD4-205ENST00000562310 DHDDSQ86SQ9 333 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 SLC35F3Q8IY50 421 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 TMEM132CQ8N3T6 1108 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 FBXW8Q8N3Y1 598 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 C19orf47Q8N9M1 422 aaKnown RBP13.63□□□□□ -0.23
COMMD4-205ENST00000562310 CAMKVQ8NCB2 501 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 FAM13CQ8NE31 585 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 OR2L5Q8NG80 312 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 OR8J2Q8NGG1 315 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 OR4C6Q8NH72 309 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 CDC26Q8NHZ8 85 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 SAP25Q8TEE9 199 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 C16orf78Q8WTQ4 265 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 GAL3ST3Q96A11 431 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 RERGQ96A58 199 aaPredicted RBP13.63□□□□□ -0.23
COMMD4-205ENST00000562310 LRRC58Q96CX6 371 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 ITCHQ96J02 903 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 OR52E6Q96RD3 313 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 GPATCH1Q9BRR8 931 aaKnown RBP13.63□□□□□ -0.23
COMMD4-205ENST00000562310 TBCDQ9BTW9 1192 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 SLC6A16Q9GZN6 736 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 DDX31Q9H8H2 851 aaKnown RBP13.63□□□□□ -0.23
COMMD4-205ENST00000562310 C1GALT1Q9NS00 363 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 ATAD3AQ9NVI7 634 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 EVA1BQ9NVM1 165 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 MAP10Q9P2G4 905 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 LRIT1Q9P2V4 623 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 ATP6V1HQ9UI12 483 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 PILRAQ9UKJ1 303 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 MAN2B2Q9Y2E5 1009 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 KLHL20Q9Y2M5 609 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 PCDHGA7Q9Y5G6 932 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 PCDHGA5Q9Y5G8 931 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 RNF215Q9Y6U7 377 aa13.63□□□□□ -0.23
COMMD4-205ENST00000562310 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.63□□□□□ -0.23
COMMD4-205ENST00000562310 TLCD2A6NGC4 264 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 FXYD1O00168 92 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 AKAP10O43572 662 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 DUX1O43812 170 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 GUCY1B2O75343 617 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 EPN2O95208 641 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 LRATO95237 230 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 KCNH1O95259 989 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 GIMD1P0DJR0 217 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 TPP2P29144 1249 aaPredicted RBP13.62□□□□□ -0.23
COMMD4-205ENST00000562310 DGKQP52824 942 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 GPLD1P80108 840 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 PDE7AQ13946 482 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 UGT8Q16880 541 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 HKDC1Q2TB90 917 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 ZC3H12BQ5HYM0 836 aaKnown RBP13.62□□□□□ -0.23
COMMD4-205ENST00000562310 SAMD4BQ5PRF9 694 aaKnown RBP13.62□□□□□ -0.23
COMMD4-205ENST00000562310 WASHC2DQ5SRD0 308 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 MANEAQ5SRI9 462 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 ANXA8L1Q5VT79 327 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 OR4C11Q6IEV9 310 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 FAM71E1Q6IPT2 247 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 IRGCQ6NXR0 463 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 VN1R4Q7Z5H5 301 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 GPR180Q86V85 440 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.62□□□□□ -0.23
COMMD4-205ENST00000562310 MS4A6EQ96DS6 147 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 TM4SF19Q96DZ7 209 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 ZDHHC12Q96GR4 267 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 ZNF764Q96H86 408 aaPredicted RBP13.62□□□□□ -0.23
COMMD4-205ENST00000562310 EGLN2Q96KS0 407 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 OR2A5Q96R48 311 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 CDRT15Q96T59 188 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 ZNF717Q9BY31 904 aaPredicted RBP13.62□□□□□ -0.23
COMMD4-205ENST00000562310 NLNQ9BYT8 704 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 CHRNA10Q9GZZ6 450 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms