RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 C3orf62Q6ZUJ4 267 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 CYS1Q717R9 158 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 ABHD13Q7L211 337 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 TMPRSS11BQ86T26 416 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 NAV2Q8IVL1 2488 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 C17orf53Q8N3J3 647 aaPredicted RBP9.69□□□□□ -0.86
CLK3-205ENST00000561673 BCORP1Q8N888 145 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 UTP15Q8TED0 518 aaKnown RBP9.69□□□□□ -0.86
CLK3-205ENST00000561673 TBC1D20Q96BZ9 403 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 RHBDF1Q96CC6 855 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 MAGEB10Q96LZ2 347 aaPredicted RBP9.69□□□□□ -0.86
CLK3-205ENST00000561673 OR1F2PQ96R84 312 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 TAAR6Q96RI8 345 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 EGFL8Q99944 293 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 AIF1LQ9BQI0 150 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 UNKQ9C0B0 810 aaKnown RBP9.69□□□□□ -0.86
CLK3-205ENST00000561673 DERL2Q9GZP9 239 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.69□□□□□ -0.86
CLK3-205ENST00000561673 KLHL31Q9H511 634 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 CAB39LQ9H9S4 337 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 PELI2Q9HAT8 420 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 POPDC3Q9HBV1 291 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 GRHL1Q9NZI5 618 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 CTNNAL1Q9UBT7 734 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 KCNE2Q9Y6J6 123 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 TCRBV9S1A1TA0A576 114 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 A1L4Q6 167 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 NCF1BA6NI72 391 aaPredicted RBP9.68□□□□□ -0.86
CLK3-205ENST00000561673 NCF1CA8MVU1 366 aaPredicted RBP9.68□□□□□ -0.86
CLK3-205ENST00000561673 MAGEB17A8MXT2 336 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 EIF3HO15372 352 aaKnown RBP eCLIP9.68□□□□□ -0.86
CLK3-205ENST00000561673 CCDC166P0CW27 439 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 SMIM10L1P0DMW3 83 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 NCF1P14598 390 aaPredicted RBP9.68□□□□□ -0.86
CLK3-205ENST00000561673 CASQ1P31415 396 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 SLC6A12P48065 614 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 SLC12A2P55011 1212 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 GPX6P59796 221 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 RAB8AP61006 207 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 ACTN3Q08043 901 aaPredicted RBP9.68□□□□□ -0.86
CLK3-205ENST00000561673 ILF2Q12905 390 aaKnown RBP9.68□□□□□ -0.86
CLK3-205ENST00000561673 USP10Q14694 798 aaKnown RBP9.68□□□□□ -0.86
CLK3-205ENST00000561673 TGFBIQ15582 683 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 TRADDQ15628 312 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 EXT1Q16394 746 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 SFT2D3Q587I9 215 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 ZNF324BQ6AW86 544 aaPredicted RBP9.68□□□□□ -0.86
CLK3-205ENST00000561673 FCRLBQ6BAA4 426 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 H3F3CQ6NXT2 135 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 FAM180AQ6UWF9 173 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 FRA10AC1Q70Z53 315 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 ADAMTSL2Q86TH1 951 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 TRPV3Q8NET8 790 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 M1APQ8TC57 530 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 CREB3L4Q8TEY5 395 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 CDKL2Q92772 493 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 TSLPQ969D9 159 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 SMIM10Q96HG1 83 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 C5orf34Q96MH7 638 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 CPNE1Q99829 537 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 SLX1AQ9BQ83 275 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 SLC6A16Q9GZN6 736 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 AICDAQ9GZX7 198 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 RNF32Q9H0A6 362 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 OLAHQ9NV23 265 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 TEKT2Q9UIF3 430 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 OSGIN2Q9Y236 505 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.68□□□□□ -0.86
CLK3-205ENST00000561673 SPTAN1Q13813 2472 aaKnown RBP9.68□□□□□ -0.86
CLK3-205ENST00000561673 TEX15Q9BXT5 2789 aa9.68□□□□□ -0.86
CLK3-205ENST00000561673 OR5H15A6NDH6 313 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 URADA6NGE7 173 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 FAM159BA6NKW6 160 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 C4orf51C9J302 202 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 FAM227AF5H4B4 570 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 TAPBPO15533 448 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 PHGDHO43175 533 aaKnown RBP9.67□□□□□ -0.86
CLK3-205ENST00000561673 LRRTM2O43300 516 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 MAN1A2O60476 641 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 PRMT3O60678 531 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 PRAMEF2O60811 474 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 B4GALT2O60909 372 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 H2AFYO75367 372 aaKnown RBP9.67□□□□□ -0.86
CLK3-205ENST00000561673 WDR47O94967 919 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 CLDN1O95832 211 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 C1QAP02745 245 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 SERPINA6P08185 405 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 C1GALT1C1LP0DN25 315 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 GNAZP19086 355 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 ST13P50502 369 aaKnown RBP9.67□□□□□ -0.86
CLK3-205ENST00000561673 PLTPP55058 493 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 OR4D2P58180 307 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 ETF1P62495 437 aaKnown RBP9.67□□□□□ -0.86
CLK3-205ENST00000561673 SKP1P63208 163 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 BTG2P78543 158 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 OR4D1Q15615 310 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 ACER2Q5QJU3 275 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 NIPAL1Q6NVV3 410 aa9.67□□□□□ -0.86
CLK3-205ENST00000561673 PAPD4Q6PIY7 484 aaKnown RBP9.67□□□□□ -0.86
CLK3-205ENST00000561673 SYT10Q6XYQ8 523 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms