RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 MTERF1Q99551 399 aaKnown RBP10.19□□□□□ -0.78
TPM1-229ENST00000561242 CRB3Q9BUF7 120 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 SARGQ9BW04 601 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 SLC29A3Q9BZD2 475 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 TMBIM4Q9HC24 238 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 ACSS2Q9NR19 701 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 OXSMQ9NWU1 459 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 MS4A12Q9NXJ0 267 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 TRPS1Q9UHF7 1281 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 PCTPQ9UKL6 214 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 PSME2Q9UL46 239 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 ZNF490Q9ULM2 529 aaPredicted RBP10.19□□□□□ -0.78
TPM1-229ENST00000561242 SLC12A4Q9UP95 1085 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 POLHQ9Y253 713 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 NAALAD2Q9Y3Q0 740 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 MAP4K5Q9Y4K4 846 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 PCNX2A6NKB5 2137 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 LRP4O75096 1905 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 A0A087WV48 116 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 IGKV1-8A0A0C4DH67 115 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 LOC101059948A0A1B0GTJ6 334 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 TEX51A0A1B0GUA7 166 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 BLACEA4D250 179 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 H0YIV9 168 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 SGK494L7N484 410 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 SLC28A1O00337 649 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 FOXE1O00358 373 aaPredicted RBP10.18□□□□□ -0.78
TPM1-229ENST00000561242 RGS14O43566 566 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 NPHS1O60500 1241 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 TIAF1O95411 115 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 SFTPCP11686 197 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 RNH1P13489 461 aaKnown RBP10.18□□□□□ -0.78
TPM1-229ENST00000561242 ICAM2P13598 275 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 LIFP15018 202 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 TSPAN8P19075 237 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 TNNI3P19429 210 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 PPP2R1BP30154 601 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 BUD31P41223 144 aaPredicted RBP10.18□□□□□ -0.78
TPM1-229ENST00000561242 CCR10P46092 362 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 YBX1P67809 324 aaKnown RBP10.18□□□□□ -0.78
TPM1-229ENST00000561242 ZNF33BQ06732 778 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 STX4Q12846 297 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 PRTGQ2VWP7 1150 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 EXOC3L1Q86VI1 746 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 DDIASQ8IXT1 998 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.18□□□□□ -0.78
TPM1-229ENST00000561242 CDYL2Q8N8U2 506 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 L3MBTL4Q8NA19 623 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 CLEC1AQ8NC01 280 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 KCT2Q8NC54 265 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 OR2L5Q8NG80 312 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 OR9A4Q8NGU2 314 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 OR51Q1Q8NH59 317 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 HUS1BQ8NHY5 278 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 ZNF483Q8TF39 744 aaPredicted RBP10.18□□□□□ -0.78
TPM1-229ENST00000561242 L3HYPDHQ96EM0 354 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 WDR34Q96EX3 536 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 SLC45A3Q96JT2 553 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 CDK15Q96Q40 435 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 SERINC2Q96SA4 455 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 ZNF382Q96SR6 550 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 MACROD1Q9BQ69 325 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 FAIM2Q9BWQ8 316 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 NPLQ9BXD5 320 aaPredicted RBP10.18□□□□□ -0.78
TPM1-229ENST00000561242 ILKAPQ9H0C8 392 aaPredicted RBP10.18□□□□□ -0.78
TPM1-229ENST00000561242 ACTL8Q9H568 366 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 SEMA3GQ9NS98 782 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 PHF11Q9UIL8 331 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 TCFL5Q9UL49 500 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 MKL2Q9ULH7 1088 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 MAN2B2Q9Y2E5 1009 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 RNF11Q9Y3C5 154 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 FIS1Q9Y3D6 152 aa10.18□□□□□ -0.78
TPM1-229ENST00000561242 WDFY4Q6ZS81 3184 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 A0A1W2PNU3 283 aaPredicted RBP10.17□□□□□ -0.78
TPM1-229ENST00000561242 SRRM3A6NNA2 597 aaPredicted RBP10.17□□□□□ -0.78
TPM1-229ENST00000561242 EFSO43281 561 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 SH3BGRLO75368 114 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 WFS1O76024 890 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 OR4F21O95013 312 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 RECKO95980 971 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 CAPN1P07384 714 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 RPS17P08708 135 aaKnown RBP10.17□□□□□ -0.78
TPM1-229ENST00000561242 UROSP10746 265 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 HSD3B1P14060 373 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 COX7A2P14406 83 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 CPN2P22792 545 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 HSD3B2P26439 372 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 TSFMP43897 325 aaKnown RBP10.17□□□□□ -0.78
TPM1-229ENST00000561242 GABRA4P48169 554 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 SLC13A2Q13183 592 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 UNC50Q53HI1 259 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 CCNYL2Q5T2Q4 361 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 KHDRBS2Q5VWX1 349 aaKnown RBP10.17□□□□□ -0.78
TPM1-229ENST00000561242 OR4C11Q6IEV9 310 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 TMEM214Q6NUQ4 689 aaKnown RBP10.17□□□□□ -0.78
TPM1-229ENST00000561242 C19orf48Q6RUI8 117 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 TIPARPQ7Z3E1 657 aaKnown RBP10.17□□□□□ -0.78
TPM1-229ENST00000561242 NUDT13Q86X67 352 aa10.17□□□□□ -0.78
TPM1-229ENST00000561242 DTX1Q86Y01 620 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms