RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 CDH3P22223 829 aa21.3■■□□□ 1
SNX22-205ENST00000560945 MC1RQ01726 317 aa21.3■■□□□ 1
SNX22-205ENST00000560945 CAPRIN1Q14444 709 aaKnown RBP21.3■■□□□ 1
SNX22-205ENST00000560945 DEFB110Q30KQ9 67 aa21.3■■□□□ 1
SNX22-205ENST00000560945 C16orf78Q8WTQ4 265 aa21.3■■□□□ 1
SNX22-205ENST00000560945 SLC13A3Q8WWT9 602 aa21.3■■□□□ 1
SNX22-205ENST00000560945 NCSTNQ92542 709 aa21.3■■□□□ 1
SNX22-205ENST00000560945 ZUFSPQ96AP4 578 aa21.3■■□□□ 1
SNX22-205ENST00000560945 MS4A6EQ96DS6 147 aa21.3■■□□□ 1
SNX22-205ENST00000560945 TGM7Q96PF1 710 aa21.3■■□□□ 1
SNX22-205ENST00000560945 TRAPPC9Q96Q05 1148 aa21.3■■□□□ 1
SNX22-205ENST00000560945 C17orf62Q9BQA9 187 aa21.3■■□□□ 1
SNX22-205ENST00000560945 GTPBP2Q9BX10 602 aaKnown RBP21.3■■□□□ 1
SNX22-205ENST00000560945 TRIM8Q9BZR9 551 aa21.3■■□□□ 1
SNX22-205ENST00000560945 PCDHGA7Q9Y5G6 932 aa21.3■■□□□ 1
SNX22-205ENST00000560945 KLK4Q9Y5K2 254 aa21.3■■□□□ 1
SNX22-205ENST00000560945 U3KQA8 63 aa21.3■■□□□ 1
SNX22-205ENST00000560945 DMDP11532 3685 aa21.3■■□□□ 1
SNX22-205ENST00000560945 SLC9B1P1A6NJY1 282 aa21.29■■□□□ 1
SNX22-205ENST00000560945 FXYD1O00168 92 aa21.29■■□□□ 1
SNX22-205ENST00000560945 ARHGAP33O14559 1287 aa21.29■■□□□ 1
SNX22-205ENST00000560945 CAPN5O15484 640 aaPredicted RBP21.29■■□□□ 1
SNX22-205ENST00000560945 B4GAT1O43505 415 aa21.29■■□□□ 1
SNX22-205ENST00000560945 NUDT21O43809 227 aaKnown RBP21.29■■□□□ 1
SNX22-205ENST00000560945 PDE5AO76074 875 aa21.29■■□□□ 1
SNX22-205ENST00000560945 SEMA3DO95025 777 aa21.29■■□□□ 1
SNX22-205ENST00000560945 CFHR1Q03591 330 aa21.29■■□□□ 1
SNX22-205ENST00000560945 PGS1Q32NB8 556 aa21.29■■□□□ 1
SNX22-205ENST00000560945 ZNF793Q6ZN11 406 aa21.29■■□□□ 1
SNX22-205ENST00000560945 TBC1D19Q8N5T2 526 aa21.29■■□□□ 1
SNX22-205ENST00000560945 TRPV3Q8NET8 790 aa21.29■■□□□ 1
SNX22-205ENST00000560945 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.29■■□□□ 1
SNX22-205ENST00000560945 TSPEARQ8WU66 669 aa21.29■■□□□ 1
SNX22-205ENST00000560945 SEMA6CQ9H3T2 930 aa21.29■■□□□ 1
SNX22-205ENST00000560945 TMEM45AQ9NWC5 275 aa21.29■■□□□ 1
SNX22-205ENST00000560945 ANKMY1Q9P2S6 941 aa21.29■■□□□ 1
SNX22-205ENST00000560945 MCM8Q9UJA3 840 aa21.29■■□□□ 1
SNX22-205ENST00000560945 PADI4Q9UM07 663 aa21.29■■□□□ 1
SNX22-205ENST00000560945 IGHV1OR21-1A0A087WYE8 117 aa21.29■■□□□ 1
SNX22-205ENST00000560945 SIGLEC6O43699 453 aa21.29■■□□□ 1
SNX22-205ENST00000560945 GLB1P16278 677 aa21.29■■□□□ 1
SNX22-205ENST00000560945 MPLP40238 635 aa21.29■■□□□ 1
SNX22-205ENST00000560945 RAB8AP61006 207 aa21.29■■□□□ 1
SNX22-205ENST00000560945 ZNF763Q0D2J5 394 aa21.29■■□□□ 1
SNX22-205ENST00000560945 ADPRMQ3LIE5 342 aa21.29■■□□□ 1
SNX22-205ENST00000560945 AMZ1Q400G9 498 aa21.29■■□□□ 1
SNX22-205ENST00000560945 C8orf82Q6P1X6 216 aaPredicted RBP21.29■■□□□ 1
SNX22-205ENST00000560945 KLHL35Q6PF15 583 aa21.29■■□□□ 1
SNX22-205ENST00000560945 C16orf89Q6UX73 402 aa21.29■■□□□ 1
SNX22-205ENST00000560945 ASPGQ86U10 573 aa21.29■■□□□ 1
SNX22-205ENST00000560945 PGAM4Q8N0Y7 254 aa21.29■■□□□ 1
SNX22-205ENST00000560945 OR4C6Q8NH72 309 aa21.29■■□□□ 1
SNX22-205ENST00000560945 RGMAQ96B86 450 aa21.29■■□□□ 1
SNX22-205ENST00000560945 ZFYVE21Q9BQ24 234 aa21.29■■□□□ 1
SNX22-205ENST00000560945 LRFN3Q9BTN0 628 aa21.29■■□□□ 1
SNX22-205ENST00000560945 SLC6A16Q9GZN6 736 aa21.29■■□□□ 1
SNX22-205ENST00000560945 KLHL3Q9UH77 587 aa21.29■■□□□ 1
SNX22-205ENST00000560945 LEF1Q9UJU2 399 aaPredicted RBP21.29■■□□□ 1
SNX22-205ENST00000560945 ERI3O43414 337 aaKnown RBP21.28■■□□□ 1
SNX22-205ENST00000560945 TMPRSS11DO60235 418 aa21.28■■□□□ 1
SNX22-205ENST00000560945 PGRP06401 933 aa21.28■■□□□ 1
SNX22-205ENST00000560945 CCT8P50990 548 aa21.28■■□□□ 1
SNX22-205ENST00000560945 TAS2R50P59544 299 aa21.28■■□□□ 1
SNX22-205ENST00000560945 PSME3P61289 254 aa21.28■■□□□ 1
SNX22-205ENST00000560945 PRSS53Q2L4Q9 553 aa21.28■■□□□ 1
SNX22-205ENST00000560945 OR4F3Q6IEY1 312 aa21.28■■□□□ 1
SNX22-205ENST00000560945 ZCCHC8Q6NZY4 707 aaKnown RBP21.28■■□□□ 1
SNX22-205ENST00000560945 RNF44Q7L0R7 432 aa21.28■■□□□ 1
SNX22-205ENST00000560945 ULK2Q8IYT8 1036 aa21.28■■□□□ 1
SNX22-205ENST00000560945 EID2Q8N6I1 236 aa21.28■■□□□ 1
SNX22-205ENST00000560945 GLB1L3Q8NCI6 653 aaPredicted RBP21.28■■□□□ 1
SNX22-205ENST00000560945 FAM13CQ8NE31 585 aa21.28■■□□□ 1
SNX22-205ENST00000560945 CCDC74AQ96AQ1 378 aa21.28■■□□□ 1
SNX22-205ENST00000560945 TM4SF19Q96DZ7 209 aa21.28■■□□□ 1
SNX22-205ENST00000560945 RAB3IPQ96QF0 476 aaPredicted RBP21.28■■□□□ 1
SNX22-205ENST00000560945 TMEM9Q9P0T7 183 aa21.28■■□□□ 1
SNX22-205ENST00000560945 RALGAPA1Q6GYQ0 2036 aa21.28■■□□□ 1
SNX22-205ENST00000560945 H0YGG7 62 aa21.27■■□□□ 1
SNX22-205ENST00000560945 SCAMP2O15127 329 aaKnown RBP21.27■■□□□ 1
SNX22-205ENST00000560945 EPN2O95208 641 aa21.27■■□□□ 1
SNX22-205ENST00000560945 PIM1P11309 404 aaPredicted RBP21.27■■□□□ 1
SNX22-205ENST00000560945 EFNA1P20827 205 aaPredicted RBP21.27■■□□□ 1
SNX22-205ENST00000560945 PRPS1L1P21108 318 aa21.27■■□□□ 1
SNX22-205ENST00000560945 ARF3P61204 181 aaPredicted RBP21.27■■□□□ 1
SNX22-205ENST00000560945 ELF3P78545 371 aaPredicted RBP21.27■■□□□ 1
SNX22-205ENST00000560945 NFYCQ13952 458 aa21.27■■□□□ 1
SNX22-205ENST00000560945 ZNF385BQ569K4 471 aa21.27■■□□□ 1
SNX22-205ENST00000560945 CCNYL2Q5T2Q4 361 aa21.27■■□□□ 1
SNX22-205ENST00000560945 OR4C11Q6IEV9 310 aa21.27■■□□□ 1
SNX22-205ENST00000560945 GUSBP11Q6P575 273 aa21.27■■□□□ 1
SNX22-205ENST00000560945 RNF148Q8N7C7 305 aa21.27■■□□□ 1
SNX22-205ENST00000560945 C19orf47Q8N9M1 422 aaKnown RBP21.27■■□□□ 1
SNX22-205ENST00000560945 TESCQ96BS2 214 aa21.27■■□□□ 1
SNX22-205ENST00000560945 CDRT15Q96T59 188 aa21.27■■□□□ 1
SNX22-205ENST00000560945 AHSPQ9NZD4 102 aa21.27■■□□□ 1
SNX22-205ENST00000560945 GMPR2Q9P2T1 348 aaKnown RBP21.27■■□□□ 1
SNX22-205ENST00000560945 CROTQ9UKG9 612 aa21.27■■□□□ 1
SNX22-205ENST00000560945 GABRR3A8MPY1 467 aa21.27■□□□□ 0.99
SNX22-205ENST00000560945 H0YHG0 523 aa21.27■□□□□ 0.99
SNX22-205ENST00000560945 FKBP9O95302 570 aa21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms