RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 ACMSDQ8TDX5 336 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 SEC16BQ96JE7 1060 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 MRPL57Q9BQC6 102 aaKnown RBP14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 CCDC77Q9BR77 488 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 CRB3Q9BUF7 120 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 EFCAB11Q9BUY7 163 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 SLC25A18Q9H1K4 315 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 MRPL46Q9H2W6 279 aaKnown RBP14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 C14orf105Q9NVL8 296 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 TMEM216Q9P0N5 145 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 C3orf18Q9UK00 162 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 FASNP49327 2511 aaKnown RBP14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 ZNF462Q96JM2 2506 aa14.45□□□□□ -0.1
SNRPA1-213ENST00000560856 A0A1W2PPM1 405 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 A0A1W2PQ72 361 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 LRIT2A6NDA9 550 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 ZNF860A6NHJ4 632 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 IDSB3KWA1 339 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 STX16-NPEPL1H3BU86 382 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 AGPSO00116 658 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 E2F3O00716 465 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 STX16O14662 325 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 CLEC3AO75596 197 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 IGHEP01854 428 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 PDGFAP04085 211 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 EPB42P16452 691 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 GSTM2P28161 218 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 HNRNPH1P31943 449 aaKnown RBP14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 CCL11P51671 97 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 EMP2P54851 167 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 LAPTM5Q13571 262 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 DEFB134Q4QY38 66 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 DCAF10Q5QP82 559 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 TCTN3Q6NUS6 607 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 METTL2BQ6P1Q9 378 aaKnown RBP14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 LAS2Q8IYD9 372 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 OR11G2Q8NGC1 345 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 OR5T3Q8NGG3 340 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 MS4A6EQ96DS6 147 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 SCYL1Q96KG9 808 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 YIPF2Q9BWQ6 316 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 HCN3Q9P1Z3 774 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 TBK1Q9UHD2 729 aa14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 TNPO3Q9Y5L0 923 aaKnown RBP14.44□□□□□ -0.1
SNRPA1-213ENST00000560856 DOCK10Q96BY6 2186 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 MKRN2OSH3BPM6 223 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 GOLGA8RI6L899 631 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 PEX12O00623 359 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 PYGBP11216 843 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 NR1D1P20393 614 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 HNF4AP41235 474 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 XCR1P46094 333 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 SLCO1A2P46721 670 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 RRADP55042 308 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 SOX8P57073 446 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 RAB8AP61006 207 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 GTF2H2Q13888 395 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 TOR1AIP1Q5JTV8 583 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 GTF2H2CQ6P1K8 395 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 TMEM205Q6UW68 189 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 GOLGA7Q7Z5G4 137 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 LCA5Q86VQ0 697 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 CNPY4Q8N129 248 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 C9orf43Q8TAL5 461 aaPredicted RBP14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 EPS8L3Q8TE67 593 aaKnown RBP14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 ZNF473Q8WTR7 871 aaKnown RBP14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 CAVIN3Q969G5 261 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 PHF21BQ96EK2 531 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 FER1L6-AS2Q96M78 137 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 QRFPRQ96P65 431 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 PARD6BQ9BYG5 372 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 VN1R1Q9GZP7 353 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 PPCSQ9HAB8 311 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 ZBTB26Q9HCK0 441 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 ACSS2Q9NR19 701 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 LANCL2Q9NS86 450 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 FBXL4Q9UKA2 621 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 RAB21Q9UL25 225 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 TMCO1Q9UM00 188 aa14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 PCDHGA9Q9Y5G4 932 aaKnown RBP14.43□□□□□ -0.1
SNRPA1-213ENST00000560856 CNTRLQ7Z7A1 2325 aa14.42□□□□□ -0.1
SNRPA1-213ENST00000560856 LOC102723996A0A087X1L8 192 aa14.42□□□□□ -0.1
SNRPA1-213ENST00000560856 OR2W5A6NFC9 320 aa14.42□□□□□ -0.1
SNRPA1-213ENST00000560856 ANKDD1BA6NHY2 528 aa14.42□□□□□ -0.1
SNRPA1-213ENST00000560856 EIF4E1BA6NMX2 242 aaKnown RBP14.42□□□□□ -0.1
SNRPA1-213ENST00000560856 A8MT66 165 aa14.42□□□□□ -0.1
SNRPA1-213ENST00000560856 OR7A17O14581 309 aa14.42□□□□□ -0.1
SNRPA1-213ENST00000560856 CHST10O43529 356 aa14.42□□□□□ -0.1
SNRPA1-213ENST00000560856 NUDT17P0C025 328 aa14.42□□□□□ -0.1
SNRPA1-213ENST00000560856 EEF1DP29692 281 aaKnown RBP14.42□□□□□ -0.1
SNRPA1-213ENST00000560856 RBBP7Q16576 425 aa14.42□□□□□ -0.1
SNRPA1-213ENST00000560856 PAGE2BQ5JRK9 111 aa14.42□□□□□ -0.1
SNRPA1-213ENST00000560856 GRHL2Q6ISB3 625 aa14.42□□□□□ -0.1
SNRPA1-213ENST00000560856 EMBQ6PCB8 327 aa14.42□□□□□ -0.1
SNRPA1-213ENST00000560856 ABHD13Q7L211 337 aa14.42□□□□□ -0.1
SNRPA1-213ENST00000560856 UBE3DQ7Z6J8 389 aa14.42□□□□□ -0.1
SNRPA1-213ENST00000560856 L3MBTL4Q8NA19 623 aa14.42□□□□□ -0.1
SNRPA1-213ENST00000560856 FDCSPQ8NFU4 85 aa14.42□□□□□ -0.1
SNRPA1-213ENST00000560856 OR7G3Q8NG95 312 aa14.42□□□□□ -0.1
SNRPA1-213ENST00000560856 OR2W6PQ8NHA6 318 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms