RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 CYP4F3Q08477 520 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 CSTF3Q12996 717 aaKnown RBP11.51□□□□□ -0.57
IRF9-211ENST00000560852 DSG2Q14126 1118 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 CHI3L2Q15782 390 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 HSP90B2PQ58FF3 399 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 KHDRBS2Q5VWX1 349 aaKnown RBP11.51□□□□□ -0.57
IRF9-211ENST00000560852 MRPL14Q6P1L8 145 aaKnown RBP11.51□□□□□ -0.57
IRF9-211ENST00000560852 GALNT18Q6P9A2 607 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 ABHD17CQ6PCB6 329 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 RPS27LQ71UM5 84 aaKnown RBP11.51□□□□□ -0.57
IRF9-211ENST00000560852 ABHD13Q7L211 337 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 OVCH1Q7RTY7 1134 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 CUZD1Q86UP6 607 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 LRRC34Q8IZ02 419 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 NLGN4XQ8N0W4 816 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 ARFGAP2Q8N6H7 521 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 KCT2Q8NC54 265 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 NLGN4YQ8NFZ3 816 aaPredicted RBP11.51□□□□□ -0.57
IRF9-211ENST00000560852 METTL6Q8TCB7 284 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 CDK15Q96Q40 435 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 SERPINI1Q99574 410 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 GPR87Q9BY21 358 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 WDR54Q9H977 334 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 LHX9Q9NQ69 397 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 PRDM7Q9NQW5 492 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 SLC22A11Q9NSA0 550 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 THAP1Q9NVV9 213 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 ADAM29Q9UKF5 820 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 RAP2CQ9Y3L5 183 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 TRAF6Q9Y4K3 522 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 CCL27Q9Y4X3 112 aa11.51□□□□□ -0.57
IRF9-211ENST00000560852 HEATR5BQ9P2D3 2071 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 MAGEB17A8MXT2 336 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 MANBAO00462 879 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 AZIN1O14977 448 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 RAD1O60671 282 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 NTRK1P04629 796 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 CCNYL3P0C7X3 344 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 TSPAN8P19075 237 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 NR1D1P20393 614 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 AGXTP21549 392 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 HNRNPH1P31943 449 aaKnown RBP11.5□□□□□ -0.57
IRF9-211ENST00000560852 EIF2S3P41091 472 aaKnown RBP11.5□□□□□ -0.57
IRF9-211ENST00000560852 STAT5AP42229 794 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 PCBP4P57723 403 aaKnown RBP11.5□□□□□ -0.57
IRF9-211ENST00000560852 PHEXP78562 749 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 OCRLQ01968 901 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 TGM3Q08188 693 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 IFT88Q13099 833 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 STX3Q13277 289 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 NKAIN1Q4KMZ8 207 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 PRAMEF17Q5VTA0 474 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 KANK2Q63ZY3 851 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 ATG16L1Q676U5 607 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 UBE3DQ7Z6J8 389 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 ZCCHC7Q8N3Z6 543 aaKnown RBP11.5□□□□□ -0.57
IRF9-211ENST00000560852 CDYL2Q8N8U2 506 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 ZNF248Q8NDW4 579 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 CKAP2Q8WWK9 683 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 KCNC2Q96PR1 638 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 SORT1Q99523 831 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 EFHD1Q9BUP0 239 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 ZNF717Q9BY31 904 aaPredicted RBP11.5□□□□□ -0.57
IRF9-211ENST00000560852 C20orf27Q9GZN8 174 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 REXO4Q9GZR2 422 aaKnown RBP11.5□□□□□ -0.57
IRF9-211ENST00000560852 ELOVL6Q9H5J4 265 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 DDX31Q9H8H2 851 aaKnown RBP11.5□□□□□ -0.57
IRF9-211ENST00000560852 MANSC1Q9H8J5 431 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 TNFRSF12AQ9NP84 129 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 MID1IP1Q9NPA3 183 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 PRDM9Q9NQV7 894 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 NMRK1Q9NWW6 199 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 FAM53CQ9NYF3 392 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 DNAJC15Q9Y5T4 150 aa11.5□□□□□ -0.57
IRF9-211ENST00000560852 A0A087WV48 116 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 A0A088AWK7 358 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 PCDH17O14917 1159 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 TLX3O43711 291 aaPredicted RBP11.49□□□□□ -0.57
IRF9-211ENST00000560852 EIF2S1P05198 315 aaKnown RBP11.49□□□□□ -0.57
IRF9-211ENST00000560852 CHRNGP07510 517 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 CHN1P15882 459 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 ZNF10P21506 573 aaPredicted RBP11.49□□□□□ -0.57
IRF9-211ENST00000560852 SLC1A6P48664 564 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 HK2P52789 917 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 FOXA1P55317 472 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 SNRPNP63162 240 aaKnown RBP11.49□□□□□ -0.57
IRF9-211ENST00000560852 BST1Q10588 318 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 TBL3Q12788 808 aaKnown RBP11.49□□□□□ -0.57
IRF9-211ENST00000560852 RBBP7Q16576 425 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 SMU1Q2TAY7 513 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 MRM1Q6IN84 353 aaKnown RBP11.49□□□□□ -0.57
IRF9-211ENST00000560852 ADNP2Q6IQ32 1131 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 UNQ6494/PRO21346Q6UXR6 183 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 ZCCHC23Q6ZST2 131 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 TTLL10Q6ZVT0 673 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 ZFAND4Q86XD8 727 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 PROSER1Q86XN7 944 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 PDSS2Q86YH6 399 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 METTL4Q8N3J2 472 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 AMER3Q8N944 861 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms