RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 ZNF366Q8N895 744 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 PIK3C3Q8NEB9 887 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 ABHD11Q8NFV4 315 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 OR5K2Q8NHB8 316 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 C16orf78Q8WTQ4 265 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 NUDT8Q8WV74 236 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 LZICQ8WZA0 190 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 SMPDL3AQ92484 453 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 ZNF347Q96SE7 839 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 MBOAT4Q96T53 435 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 AIF1LQ9BQI0 150 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 TIMM29Q9BSF4 260 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 TEX101Q9BY14 249 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 RSPH9Q9H1X1 276 aaPredicted RBP9.32□□□□□ -0.92
RTF1-206ENST00000560447 FZD4Q9ULV1 537 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 NAALAD2Q9Y3Q0 740 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 ZNF451Q9Y4E5 1061 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 PCDHGB1Q9Y5G3 927 aa9.32□□□□□ -0.92
RTF1-206ENST00000560447 KIAA0100Q14667 2235 aaKnown RBP9.32□□□□□ -0.92
RTF1-206ENST00000560447 A0A1B0GTW7 788 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 TBC1D3BA6NDS4 549 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 ADAMDEC1O15204 470 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 SUV39H1O43463 412 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 HS6ST1O60243 411 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 KDM1AO60341 852 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 JRKO75564 520 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 KAT7O95251 611 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 C9P02748 559 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 HLA-EP13747 358 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 ITGA2P17301 1181 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 CRHBPP24387 322 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 IGFBP5P24593 272 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 GJA4P35212 333 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 IL12RB1P42701 662 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 TNFRSF4P43489 277 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 PXNP49023 591 aaPredicted RBP9.31□□□□□ -0.92
RTF1-206ENST00000560447 CDK3Q00526 305 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 CNTN1Q12860 1018 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 LRRC23Q53EV4 343 aaPredicted RBP9.31□□□□□ -0.92
RTF1-206ENST00000560447 SLC44A4Q53GD3 710 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 KDM4DQ6B0I6 523 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 TMC5Q6UXY8 1006 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 ARMCX6Q7L4S7 300 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 ZNF551Q7Z340 670 aaPredicted RBP9.31□□□□□ -0.92
RTF1-206ENST00000560447 HORMAD1Q86X24 394 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 YAF2Q8IY57 180 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 OFCC1Q8IZS5 231 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 CHDHQ8NE62 594 aaPredicted RBP9.31□□□□□ -0.92
RTF1-206ENST00000560447 TTLQ8NG68 377 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 OR4A15Q8NGL6 344 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 OR13F1Q8NGS4 319 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 ASB12Q8WXK4 309 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 TFGQ92734 400 aaPredicted RBP9.31□□□□□ -0.92
RTF1-206ENST00000560447 FAM131CQ96AQ9 280 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 SH3KBP1Q96B97 665 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 PPCDCQ96CD2 204 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 ISOC1Q96CN7 298 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 APOL4Q9BPW4 351 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 DOHHQ9BU89 302 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 C1QTNF7Q9BXJ2 289 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 REEP1Q9H902 201 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 CXorf21Q9HAI6 301 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 CCNB1IP1Q9NPC3 277 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 THSD1Q9NS62 852 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 THUMPD1Q9NXG2 353 aaKnown RBP9.31□□□□□ -0.92
RTF1-206ENST00000560447 ENOPH1Q9UHY7 261 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 TMEFF2Q9UIK5 374 aaPredicted RBP9.31□□□□□ -0.92
RTF1-206ENST00000560447 FAF1Q9UNN5 650 aaPredicted RBP9.31□□□□□ -0.92
RTF1-206ENST00000560447 ASF1AQ9Y294 204 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 COQ6Q9Y2Z9 468 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 PCDHGB3Q9Y5G1 929 aa9.31□□□□□ -0.92
RTF1-206ENST00000560447 E9PQ18 207 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 K7ESM1 405 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 BCKDKO14874 412 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 TNFRSF21O75509 655 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 SEC14L2O76054 403 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 DXOO77932 396 aaKnown RBP9.3□□□□□ -0.92
RTF1-206ENST00000560447 SEC24DO94855 1032 aaPredicted RBP9.3□□□□□ -0.92
RTF1-206ENST00000560447 ZNF682O95780 498 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 EPHX1P07099 455 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 ETS2P15036 469 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 JUNDP17535 347 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 ITIH1P19827 911 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 UQCRC2P22695 453 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 SHMT2P34897 504 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 SOX11P35716 441 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 TRIM23P36406 574 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 CCR8P51685 355 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 CDH15P55291 814 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 ISL1P61371 349 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 SELENOWP63302 87 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 REEP5Q00765 189 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 MVKQ03426 396 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 C2orf80Q0P641 193 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 SLC14A1Q13336 389 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 NFE2L1Q14494 772 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 RAB39AQ14964 217 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 CST6Q15828 149 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 POM121L1PQ3SYA9 428 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 CRB2Q5IJ48 1285 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms