RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 TMEM211Q6ICI0 200 aa8.81□□□□□ -1
SMAD3-215ENST00000560424 CLEC9AQ6UXN8 241 aa8.81□□□□□ -1
SMAD3-215ENST00000560424 DOLPP1Q86YN1 238 aa8.81□□□□□ -1
SMAD3-215ENST00000560424 DMRTC2Q8IXT2 367 aaPredicted RBP8.81□□□□□ -1
SMAD3-215ENST00000560424 TMEM178AQ8NBL3 297 aa8.81□□□□□ -1
SMAD3-215ENST00000560424 OR5AR1Q8NGP9 310 aa8.81□□□□□ -1
SMAD3-215ENST00000560424 OR4L1Q8NH43 312 aa8.81□□□□□ -1
SMAD3-215ENST00000560424 HEXDCQ8WVB3 486 aa8.81□□□□□ -1
SMAD3-215ENST00000560424 HDAC10Q969S8 669 aa8.81□□□□□ -1
SMAD3-215ENST00000560424 ULK4Q96C45 1275 aa8.81□□□□□ -1
SMAD3-215ENST00000560424 APOPT1Q96IL0 206 aa8.81□□□□□ -1
SMAD3-215ENST00000560424 VPS39Q96JC1 886 aa8.81□□□□□ -1
SMAD3-215ENST00000560424 DNAJC1Q96KC8 554 aaKnown RBP8.81□□□□□ -1
SMAD3-215ENST00000560424 C18orf12Q96KH6 178 aa8.81□□□□□ -1
SMAD3-215ENST00000560424 ALPK1Q96QP1 1244 aa8.81□□□□□ -1
SMAD3-215ENST00000560424 COPS8Q99627 209 aa8.81□□□□□ -1
SMAD3-215ENST00000560424 CAPS2Q9BXY5 557 aa8.81□□□□□ -1
SMAD3-215ENST00000560424 OR52A5Q9H2C5 316 aa8.81□□□□□ -1
SMAD3-215ENST00000560424 DLL4Q9NR61 685 aa8.81□□□□□ -1
SMAD3-215ENST00000560424 IARS2Q9NSE4 1012 aaKnown RBP8.81□□□□□ -1
SMAD3-215ENST00000560424 SPHK1Q9NYA1 384 aa8.81□□□□□ -1
SMAD3-215ENST00000560424 VPS9D1Q9Y2B5 631 aa8.81□□□□□ -1
SMAD3-215ENST00000560424 IGHV1-45A0A0A0MS14 117 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 FAM171A2A8MVW0 826 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 PFDN6O15212 129 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 TPOP07202 933 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 GSTA1P08263 222 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 ITGAMP11215 1152 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 COL6A2P12110 1019 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 CHN1P15882 459 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 CREB1P16220 341 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 IGFBP2P18065 325 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 FBLP22087 321 aaKnown RBP8.8□□□□□ -1
SMAD3-215ENST00000560424 MSX1P28360 303 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 GABRB3P28472 473 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 PDHA2P29803 388 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 CHRNB4P30926 498 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 FOXN2P32314 431 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 CRHR1P34998 444 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 SLC1A2P43004 574 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 ETV4P43268 484 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 CCT5P48643 541 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 XIAPP98170 497 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 POU4F1Q01851 419 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 MPP2Q14168 576 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 ZKSCAN8Q15776 578 aaPredicted RBP8.8□□□□□ -1
SMAD3-215ENST00000560424 MROH9Q5TGP6 573 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 TMEM198Q66K66 360 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 PRMT9Q6P2P2 845 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 NAPRTQ6XQN6 538 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 RGS9BPQ6ZS82 235 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 CXXC5Q7LFL8 322 aaKnown RBP8.8□□□□□ -1
SMAD3-215ENST00000560424 SDCCAG8Q86SQ7 713 aaPredicted RBP8.8□□□□□ -1
SMAD3-215ENST00000560424 TBC1D21Q8IYX1 336 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 HORMAD2Q8N7B1 307 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 OR4K2Q8NGD2 314 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 OR13C4Q8NGS5 318 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 GOT1L1Q8NHS2 421 aaPredicted RBP8.8□□□□□ -1
SMAD3-215ENST00000560424 RND1Q92730 232 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 SLC22A18Q96BI1 424 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 ZNF354BQ96LW1 612 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 DMRTA2Q96SC8 542 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 MESP1Q9BRJ9 268 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 POPDC3Q9HBV1 291 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 INTS9Q9NV88 658 aaKnown RBP8.8□□□□□ -1
SMAD3-215ENST00000560424 NKIRAS1Q9NYS0 192 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 DCDC2Q9UHG0 476 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 PLEKHA6Q9Y2H5 1048 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 KLHL20Q9Y2M5 609 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 CPAMD8Q8IZJ3 1885 aa8.8□□□□□ -1
SMAD3-215ENST00000560424 INTS1Q8N201 2190 aaKnown RBP8.79□□□□□ -1
SMAD3-215ENST00000560424 TRBV5-4A0A0C4DH59 114 aa8.79□□□□□ -1
SMAD3-215ENST00000560424 CCDC189A1A4V9 331 aa8.79□□□□□ -1
SMAD3-215ENST00000560424 CCDC162PA2VCL2 907 aa8.79□□□□□ -1
SMAD3-215ENST00000560424 KIAA1324LA8MWY0 1029 aaPredicted RBP8.79□□□□□ -1
SMAD3-215ENST00000560424 IDSB3KWA1 339 aa8.79□□□□□ -1
SMAD3-215ENST00000560424 GAPDHSO14556 408 aaPredicted RBP8.79□□□□□ -1
SMAD3-215ENST00000560424 CD3EAPO15446 510 aaKnown RBP8.79□□□□□ -1
SMAD3-215ENST00000560424 GLRA3O75311 464 aa8.79□□□□□ -1
SMAD3-215ENST00000560424 WISP2O76076 250 aa8.79□□□□□ -1
SMAD3-215ENST00000560424 S1PR4O95977 384 aa8.79□□□□□ -1
SMAD3-215ENST00000560424 GOT2P00505 430 aaKnown RBP8.79□□□□□ -1
SMAD3-215ENST00000560424 CELA2AP08217 269 aa8.79□□□□□ -1
SMAD3-215ENST00000560424 HOXD4P09016 255 aaPredicted RBP8.79□□□□□ -1
SMAD3-215ENST00000560424 INHBBP09529 407 aa8.79□□□□□ -1
SMAD3-215ENST00000560424 DHRS4L1P0CG22 281 aa8.79□□□□□ -1
SMAD3-215ENST00000560424 PYGBP11216 843 aa8.79□□□□□ -1
SMAD3-215ENST00000560424 ZNF24P17028 368 aa8.79□□□□□ -1
SMAD3-215ENST00000560424 ITGALP20701 1170 aa8.79□□□□□ -1
SMAD3-215ENST00000560424 CRABP2P29373 138 aa8.79□□□□□ -1
SMAD3-215ENST00000560424 LSP1P33241 339 aa8.79□□□□□ -1
SMAD3-215ENST00000560424 GRIA3P42263 894 aa8.79□□□□□ -1
SMAD3-215ENST00000560424 GCGRP47871 477 aa8.79□□□□□ -1
SMAD3-215ENST00000560424 TTPAP49638 278 aa8.79□□□□□ -1
SMAD3-215ENST00000560424 GYS2P54840 703 aa8.79□□□□□ -1
SMAD3-215ENST00000560424 VSX2P58304 361 aaPredicted RBP8.79□□□□□ -1
SMAD3-215ENST00000560424 ADAM8P78325 824 aa8.79□□□□□ -1
SMAD3-215ENST00000560424 HSF1Q00613 529 aa8.79□□□□□ -1
SMAD3-215ENST00000560424 OC90Q02509 493 aaPredicted RBP8.79□□□□□ -1
SMAD3-215ENST00000560424 CTBP1Q13363 440 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms